v0.7.3

[0.7.3] (1 Aug 2024)

This release of Dorado updates dorado correct to fix handling of high copy repeats and avoid shutdown hanging. It also includes dorado demux improvements to reduce false matches in midstrand barcode detection and ensure correct file naming, along with other fixes.

• 5dc78ab - Remove limit on number of overlaps considered during all-vs-all alignment in dorado correct
• 2741de7 - Prevent hang during shutdown of dorado correct and prevent out of memory errors
• 37d316c - Remove unused --read-ids and --threads parameters from dorado correct
• ddb13de - Increase the threshold for midstrand barcode detection to reduce false matches
• 845a3ad - Fix misnaming by dorado demux of barcode file for barcodes ending in a letter (e.g., 12a)
• 56d3e8e - Fix seq/qual orientation when demultiplexing aligned BAMs
• 5ddfc2f - Fix bug causing CUDA illegal memory access with v5 RNA SUP and mods