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126 Open 973 Closed
126 Open 973 Closed
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Issues list

Issue with --estimate-poly-a polyA Issue related to polyA tail estimation
#1127 opened Nov 11, 2024 by Suchi-alt
3
Methylation calling v5.0.0_5mCG_5hmCG@v2 model output non-CpG results
#1126 opened Nov 9, 2024 by liuyang2006
6
Dorado demux unexplained unclassified read barcode Issues related to barcoding
#1124 opened Nov 8, 2024 by GeorgescuC
1
'XM' tag not found by grep. (call from pod5) documentation Improvements or additions to documentation mods For issues related to modified base calling
#1123 opened Nov 8, 2024 by ysuzuki1978
1
SUP Modification Basecalling Model Architecture models Issues related to model selection mods For issues related to modified base calling question Issue is a question
#1121 opened Nov 6, 2024 by harikaurel
1
Recommended max_barcode_penalty for a given barcode length barcode Issues related to barcoding question Issue is a question
#1119 opened Nov 5, 2024 by lonsbio
1
Automated Model Selection for Fast5 File to FastQ File documentation Improvements or additions to documentation models Issues related to model selection
#1116 opened Nov 2, 2024 by pinkfairy57
1
Dorado Demultiplexing Inconsistency barcode Issues related to barcoding documentation Improvements or additions to documentation
#1111 opened Oct 29, 2024 by okverynice
2
Quality score differences when running dorado on the Gridion vs on a linux server models Issues related to model selection
#1110 opened Oct 29, 2024 by abridgeland
3
Why was 260 bps deprecated? question Issue is a question
#1109 opened Oct 29, 2024 by hjarnek
7
estimate polyA doesn't find tails well with custom primer polyA Issue related to polyA tail estimation
#1108 opened Oct 29, 2024 by shaohuishi
3
Methylation tag (MM:Z) broken when there are no methylated cytosines called for [email protected] basecalling model mods For issues related to modified base calling
#1107 opened Oct 29, 2024 by jenni-westoby
1
correct from-paf does a little chunk then stops read_correction Read error correction
#1106 opened Oct 28, 2024 by matthewhvandam
1
Where to get 2021-05-17_dna_r9.4.1_minion_96_29d8704b model
#1104 opened Oct 27, 2024 by Rohit-Satyam
2
Dorado 'sup' RAM overflow on Windows, only with large pod5 files (weird bug) bug Something isn't working
#1103 opened Oct 26, 2024 by GabeAl
1
alignment with "dorado basecaller" command aligner Issues related to aligner question Issue is a question
#1102 opened Oct 25, 2024 by Flower9618
1
The lowest GPU memory required for dorado correct？ read_correction Read error correction
#1100 opened Oct 24, 2024 by hrluo93
3
Automatic model selection fails for R10.4 models Issues related to model selection
#1095 opened Oct 22, 2024 by mjlarsen
1
Request to make run name in output files from dorado demux an option enhancement New feature or request
#1094 opened Oct 22, 2024 by wshropshire
2
Poly(A) Sequence and Subsequent Analysis
#1090 opened Oct 19, 2024 by x1han
1
How does dorado handle 3D data question Issue is a question
#1089 opened Oct 18, 2024 by happier21
4
I am encountering an ANE evaluation error when running Dorado on macOS.
#1087 opened Oct 17, 2024 by GanchimegNamuunbayar
9
--max-reads on dorado duplex enhancement New feature or request
#1084 opened Oct 15, 2024 by lucacozzuto
1
Dorado Correct Not Finishing bug Something isn't working read_correction Read error correction
#1081 opened Oct 14, 2024 by jp-jong
2
Epigenetic Analysis Pipeline Issue: "Failed to Get Modbase Info AUX Data Not Found mods For issues related to modified base calling
#1080 opened Oct 13, 2024 by priyanagpal25
2
ProTip! Exclude everything labeled bug with -label:bug.