Deprecate user settings variables outside of UserSettings

[ychiucco]

This is the PR for v2.6.1. It's ready to merge, but we should only do it after 2.6.0 is released.

closes #1786
closes #1787
closes #1805

Checklist before merging

• I released v2.6.0
• I added an appropriate entry to CHANGELOG.md
• I added logging to new code - if appropriate.
• I merged main into the current branch.

[github-actions]

Benchmark comparison

GET /api/alive/

User	Time current (ms)	Time main (ms)	Ratio current/main	Size current (Kb)	Size main (Kb)
vanilla	0.8	1.0	0.80	0.0	0.0
power	0.8	0.9	0.89	0.0	0.0
dataset	0.8	0.8	1.00	0.0	0.0
project	0.8	0.8	1.00	0.0	0.0
job	0.8	0.8	1.00	0.0	0.0

GET /api/v2/dataset/

User	Time current (ms)	Time main (ms)	Ratio current/main	Size current (Kb)	Size main (Kb)
vanilla	10.3	11.5	0.90	0.6	0.6
power	386.9	423.4	0.91	389.0	389.0
dataset	152.6	165.0	0.92	145.6	145.6
project	46.7	52.6	0.89	50.9	50.9
job	27.1	29.9	0.91	35.3	35.3

GET /api/v2/job/

User	Time current (ms)	Time main (ms)	Ratio current/main	Size current (Kb)	Size main (Kb)
vanilla	6.6	7.9	0.84	2.2	2.2
power	133.2	145.8	0.91	652.0	652.0
dataset	135.0	148.8	0.91	904.8	904.8
project	44.0	48.8	0.90	283.7	283.7
job	36.4	43.5	0.84	224.8	224.8

GET /api/v2/project/

User	Time current (ms)	Time main (ms)	Ratio current/main	Size current (Kb)	Size main (Kb)
vanilla	7.9	9.1	0.87	0.1	0.1
power	8.4	8.9	0.94	0.1	0.1
dataset	7.8	8.9	0.88	0.1	0.1
project	9.6	10.9	0.88	2.3	2.3
job	7.7	8.6	0.90	0.1	0.1

GET /api/v2/workflow/

User	Time current (ms)	Time main (ms)	Ratio current/main	Size current (Kb)	Size main (Kb)
vanilla	14.3	13.1	1.09	0.8	0.8
power	24.4	27.0	0.90	27.2	27.2
dataset	19.2	21.6	0.89	15.8	15.8
project	22.4	24.5	0.91	19.9	19.9
job	11.7	12.3	0.95	0.8	0.8

POST /api/v2/project/3/dataset/420/images/query/

User	Time current (ms)	Time main (ms)	Ratio current/main	Size current (Kb)	Size main (Kb)
dataset	148.8	158.2	0.94	275.1	275.1

GET /auth/current-user/

User	Time current (ms)	Time main (ms)	Ratio current/main	Size current (Kb)	Size main (Kb)
vanilla	5.2	5.4	0.96	0.2	0.2
power	5.0	5.3	0.94	0.2	0.2
dataset	5.0	5.3	0.94	0.2	0.2
project	5.1	5.1	1.00	0.2	0.2
job	5.1	5.2	0.98	0.2	0.2

POST /auth/token/login/

User	Time current (ms)	Time main (ms)	Ratio current/main	Size current (Kb)	Size main (Kb)
dataset	263.0	264.7	0.99	0.2	0.2

[github-actions]

Coverage report

Click to see where and how coverage changed

File	Statements	Missing	Coverage	Coverage (new stmts)	Lines missing
fractal_server
config.py
fractal_server/app/models
security.py
fractal_server/app/runner/executors/slurm/sudo
executor.py
Project Total

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