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whitespace correction
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rkpfeil committed Aug 21, 2023
1 parent 11e6d73 commit 064ec5b
Showing 1 changed file with 2 additions and 1 deletion.
3 changes: 2 additions & 1 deletion src/correction_stats.py
Original file line number Diff line number Diff line change
Expand Up @@ -2,13 +2,15 @@

from .common import junctions_from_blocks, overlaps


@unique
class Stats(Enum):
true_negative = 1 #correct before and not changed
false_negative = 2 #either changed but not correct after or not correct before and not changed
true_positive = 3 #changed and it is correct after
false_positive = 4 #changed and it is not correct after but was correct before


class CorrectionStats:

def __init__(self, reference_db, long_reads):
Expand Down Expand Up @@ -40,7 +42,6 @@ def get_introns_from_transcript(self, transcript):
introns = set(introns)
return introns


def read_stats(self, introns, corrected_introns, alignment):
name = alignment.query_name
name = name.split('_')[0]
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