v0.1.1

SciMLBenchmarks v0.1.1

Diff since v0.1.0

Closed issues:

• Interesting benchmark problems (#35)
• Missing BCR (1122) benchmark page (#185)
• Fix DynamicalODE Benchmarks (#261)
• Fix Jumps Benchmarks (#262)
• Fix VanDerPol and ROBER notebooks (#325)
• Scale which benchmarking has been done? (#399)
• Jump process benchmarks are old (#456)

Merged pull requests:

• update DynamicalODE benchmarks (#229) (@ChrisRackauckas)
• update Jumps benchmarks (#230) (@ChrisRackauckas)
• fix liquid argon (#245) (@ChrisRackauckas)
• bump parameter estimation benchmarks (#246) (@ChrisRackauckas)
• bump non-stiff SDE benchmarks (#247) (@ChrisRackauckas)
• Update BCR.jmd (#249) (@ChrisRackauckas)
• CompatHelper: add new compat entry for "SciMLBenchmarks" at version "0.1" for package Bio (#251) (@github-actions[bot])
• CompatHelper: add new compat entry for "SciMLBenchmarks" at version "0.1" for package NBodySimulator (#252) (@github-actions[bot])
• CompatHelper: add new compat entry for "SciMLBenchmarks" at version "0.1" for package NonStiffDDE (#253) (@github-actions[bot])
• CompatHelper: add new compat entry for "SciMLBenchmarks" at version "0.1" for package NonStiffODE (#254) (@github-actions[bot])
• CompatHelper: add new compat entry for "SciMLBenchmarks" at version "0.1" for package NonStiffSDE (#255) (@github-actions[bot])
• CompatHelper: add new compat entry for "SciMLBenchmarks" at version "0.1" for package ParameterEstimation (#256) (@github-actions[bot])
• CompatHelper: add new compat entry for "SciMLBenchmarks" at version "0.1" for package StiffDDE (#257) (@github-actions[bot])
• CompatHelper: add new compat entry for "SciMLBenchmarks" at version "0.1" for package StiffODE (#258) (@github-actions[bot])
• CompatHelper: add new compat entry for "SciMLBenchmarks" at version "0.1" for package StiffSDE (#259) (@github-actions[bot])
• CompatHelper: add new compat entry for "SciMLBenchmarks" at version "0.1" for package Testing (#260) (@github-actions[bot])
• CompatHelper: add new compat entry for "SciMLBenchmarks" at version "0.1" for package AdaptiveSDE (#263) (@github-actions[bot])
• CompatHelper: add new compat entry for "SciMLBenchmarks" at version "0.1" for package DynamicalODE (#264) (@github-actions[bot])
• CompatHelper: add new compat entry for "SciMLBenchmarks" at version "0.1" for package AdaptiveSDE (#265) (@github-actions[bot])
• CompatHelper: add new compat entry for "SciMLBenchmarks" at version "0.1" for package Jumps (#266) (@github-actions[bot])
• CompatHelper: add new compat entry for "SciMLBenchmarks" at version "0.1" for package DynamicalODE (#267) (@github-actions[bot])
• CompatHelper: add new compat entry for "SciMLBenchmarks" at version "0.1" for package MOLPDE (#268) (@github-actions[bot])
• CompatHelper: add new compat entry for "SciMLBenchmarks" at version "0.1" for package Jumps (#269) (@github-actions[bot])
• CompatHelper: add new compat entry for "SciMLBenchmarks" at version "0.1" for package MultiLanguage (#270) (@github-actions[bot])
• CompatHelper: bump compat for "BlackBoxOptim" to "0.6" for package ParameterEstimation (#272) (@github-actions[bot])
• CompatHelper: bump compat for "BlackBoxOptim" to "0.6" for package ParameterEstimation (#273) (@github-actions[bot])
• update Jump benchmarks to use Catalyst.jl (#275) (@ChrisRackauckas)
• CompatHelper: bump compat for "BenchmarkTools" to "1.0" for package NBodySimulator (#276) (@github-actions[bot])
• CompatHelper: bump compat for "BenchmarkTools" to "1.0" for package ParameterEstimation (#277) (@github-actions[bot])
• Fix DynamicalODE Benchmarks (#278) (@SebastianM-C)
• update to add QNDF (#280) (@ChrisRackauckas)
• update BCR benchmarks (#281) (@ChrisRackauckas)
• Stop the autodiff explosion in BCR (#283) (@ChrisRackauckas)
• Update 2 of the Jumps benchmarks to use Catalyst (#286) (@Gregliest)
• Update README instructions. (#287) (@Gregliest)
• [WIP] Fix Diffusion benchmark. (#288) (@Gregliest)
• Fix Mendes Benchmark (#289) (@Gregliest)
• CompatHelper: add new compat entry for "ModelingToolkit" at version "5" for package Jumps (#290) (@github-actions[bot])
• CompatHelper: bump compat for "DiffEqJump" to "7" for package Jumps (#292) (@github-actions[bot])
• CompatHelper: bump compat for "Catalyst" to "7" for package Bio (#293) (@github-actions[bot])
• CompatHelper: bump compat for "Catalyst" to "7" for package Jumps (#294) (@github-actions[bot])
• CompatHelper: bump compat for "ReactionNetworkImporters" to "0.9" for package Bio (#295) (@github-actions[bot])
• CompatHelper: bump compat for "ModelingToolkit" to "6" for package Bio (#296) (@github-actions[bot])
• CompatHelper: bump compat for "ModelingToolkit" to "6" for package Jumps (#297) (@github-actions[bot])
• CompatHelper: bump compat for ReactionNetworkImporters to
  0.10 for package Bio, (keep existing compat) (#299) (@github-actions[bot])
• CompatHelper: bump compat for Catalyst to
  8 for package Bio, (keep existing compat) (#300) (@github-actions[bot])
• CompatHelper: bump compat for Catalyst to
  8 for package Jumps, (keep existing compat) (#301) (@github-actions[bot])
• CompatHelper: bump compat for Catalyst to 8 for package Bio, (keep existing compat) (#302) (@github-actions[bot])
• CompatHelper: bump compat for ReactionNetworkImporters to 0.10 for package Bio, (keep existing compat) (#303) (@github-actions[bot])
• CompatHelper: bump compat for Catalyst to 8 for package Jumps, (keep existing compat) (#304) (@github-actions[bot])
• CompatHelper: bump compat for ReactionNetworkImporters to 0.11 for package Bio, (keep existing compat) (#305) (@github-actions[bot])
• CompatHelper: bump compat for Catalyst to 9 for package Bio, (keep existing compat) (#306) (@github-actions[bot])
• CompatHelper: bump compat for Catalyst to 9 for package Jumps, (keep existing compat) (#307) (@github-actions[bot])
• update BCR and its manifest (#308) (@isaacsas)
• Remove the pdf and notebook defaults (#311) (@ChrisRackauckas)
• CompatHelper: bump compat for Catalyst to 10 for package Jumps, (keep existing compat) (#313) (@github-actions[bot])
• CompatHelper: bump compat for ModelingToolkit to 7 for package Bio, (keep existing compat) (#315) (@github-actions[bot])
• CompatHelper: bump compat for ModelingToolkit to 7 for package Jumps, (keep existing compat) (#316) (@github-actions[bot])
• CompatHelper: bump compat for DiffEqJump to 8 for package Jumps, (keep existing compat) (#317) (@github-actions[bot])
• CompatHelper: bump compat for ReactionNetworkImporters to 0.12 for package Bio, (keep existing compat) (#318) (@github-actions[bot])
• Update bcr for defaults (#320) (@isaacsas)
• Add FBDF to the benchmarks (#321) (@YingboMa)
• Move CI to juliaecosystem (#322) (@staticfloat)
• No pdf (#323) (@ChrisRackauckas)
• fix test, again (#324) (@ChrisRackauckas)
• Fix VanderPol and Rober benchmark (#326) (@junpenggao233)
• Add NeuralPDE Paper Benchmarks (#327) (@ChrisRackauckas)
• CompatHelper: add new compat entry for QuasiMonteCarlo at version 0.2 for package PINNErrorsVsTime, (keep existing compat) (#328) (@github-actions[bot])
• CompatHelper: add new compat entry for Cuba at version 2 for package PINNErrorsVsTime, (keep existing compat) (#329) (@github-actions[bot])
• CompatHelper: add new compat entry for Optim at version 1 for package PINNErrorsVsTime, (keep existing compat) (#330) (@github-actions[bot])
• CompatHelper: add new compat entry for DiffEqFlux at version 1 for package PINNErrorsVsTime, (keep existing compat) (#331) (@github-actions[bot])
• CompatHelper: add new compat entry for NeuralPDE at version 4 for package PINNErrorsVsTime, (keep existing compat) (#332) (@github-actions[bot])
• CompatHelper: add new compat entry for Quadrature at version 1 for package PINNErrorsVsTime, (keep existing compat) (#333) (@github-actions[bot])
• CompatHelper: add new compat entry for Flux at version 0.12 for package PINNErrorsVsTime, (keep existing compat) (#334) (@github-actions[bot])
• CompatHelper: add new compat entry for ModelingToolkit at version 7 for package PINNErrorsVsTime, (keep existing compat) (#335) (@github-actions[bot])
• CompatHelper: add new compat entry for Cubature at version 1 for package PINNErrorsVsTime, (keep existing compat) (#336) (@github-actions[bot])
• CompatHelper: add new compat entry for GalacticOptim at version 2 for package PINNErrorsVsTime, (keep existing compat) (#337) (@github-actions[bot])
• CompatHelper: add new compat entry for NeuralPDE at version 4 for package PINNOptimizers, (keep existing compat) (#338) (@github-actions[bot])
• CompatHelper: add new compat entry for Plots at version 1 for package PINNOptimizers, (keep existing compat) (#339) (@github-actions[bot])
• CompatHelper: add new compat entry for GalacticOptim at version 2 for package PINNOptimizers, (keep existing compat) (#340) (@github-actions[bot])
• CompatHelper: add new compat entry for DiffEqFlux at version 1 for package PINNOptimizers, (keep existing compat) (#341) (@github-actions[bot])
• CompatHelper: add new compat entry for Cubature at version 1 for package PINNOptimizers, (keep existing compat) (#342) (@github-actions[bot])
• CompatHelper: add new compat entry for Cuba at version 2 for package PINNOptimizers, (keep existing compat) (#343) (@github-actions[bot])
• CompatHelper: add new compat entry for ModelingToolkit at version 7 for package PINNOptimizers, (keep existing compat) (#344) (@github-actions[bot])
• CompatHelper: add new compat entry for Optim at version 1 for package PINNOptimizers, (keep existing compat) (#345) (@github-actions[bot])
• CompatHelper: add new compat entry for Quadrature at version 1 for package PINNOptimizers, (keep existing compat) (#346) (@github-actions[bot])
• CompatHelper: add new compat entry for Flux at version 0.12 for package PINNOptimizers, (keep existing compat) (#347) (@github-actions[bot])
• Fix a bunch of PINN benchmarks (#348) (@ChrisRackauckas)
• CompatHelper: add new compat entry for SciMLBenchmarks at version 0.1 for package PINNErrorsVsTime, (keep existing compat) (#349) (@github-actions[bot])
• CompatHelper: add new compat entry for SciMLBenchmarks at version 0.1 for package PINNOptimizers, (keep existing compat) (#350) (@github-actions[bot])
• Fix burger's equation PINN chain definition (#351) (@ChrisRackauckas)
• Actually decrypt the SSH deploy key. (#352) (@staticfloat)
• Fix Allen Cahn pinn (#355) (@KirillZubov)
• ROBER DAE Benchmark (#357) (@ChrisRackauckas)
• DAE manifests for v1.6 (#361) (@ChrisRackauckas)
• CompatHelper: add new compat entry for SciMLBenchmarks at version 0.1 for package DAE, (keep existing compat) (#363) (@github-actions[bot])
• CompatHelper: add new compat entry for Plots at version 1 for package DAE, (keep existing compat) (#364) (@github-actions[bot])
• CompatHelper: add new compat entry for DASSL at version 2 for package DAE, (keep existing compat) (#365) (@github-actions[bot])
• CompatHelper: add new compat entry for DASKR at version 2 for package DAE, (keep existing compat) (#366) (@github-actions[bot])
• Smash SUNDIALS IDA in another DAE benchmark (Chemical Akzo) (#367) (@ChrisRackauckas)
• Update burgers_equation.jmd (#369) (@francescocalisto)
• Fix Chemical Akzo Benchmark (#370) (@AayushSabharwal)
• Fix a bunch of PINN benchmarks (#371) (@ChrisRackauckas)
• Fix a bunch of PINN benchmarks v2 (#374) (@KirillZubov)
• Try running Pkg.build() for conda (#375) (@staticfloat)
• CompatHelper: bump compat for OrdinaryDiffEq to 6 for package Bio, (keep existing compat) (#376) (@github-actions[bot])
• CompatHelper: bump compat for OrdinaryDiffEq to 6 for package DAE, (keep existing compat) (#377) (@github-actions[bot])
• CompatHelper: bump compat for OrdinaryDiffEq to 6 for package DynamicalODE, (keep existing compat) (#378) (@github-actions[bot])
• CompatHelper: bump compat for OrdinaryDiffEq to 6 for package Jumps, (keep existing compat) (#379) (@github-actions[bot])
• CompatHelper: bump compat for OrdinaryDiffEq to 6 for package MOLPDE, (keep existing compat) (#380) (@github-actions[bot])
• CompatHelper: bump compat for OrdinaryDiffEq to 6 for package MultiLanguage, (keep existing compat) (#381) (@github-actions[bot])
• CompatHelper: bump compat for OrdinaryDiffEq to 6 for package NBodySimulator, (keep existing compat) (#382) (@github-actions[bot])
• CompatHelper: bump compat for OrdinaryDiffEq to 6 for package NonStiffODE, (keep existing compat) (#383) (@github-actions[bot])
• CompatHelper: bump compat for OrdinaryDiffEq to 6 for package ParameterEstimation, (keep existing compat) (#384) (@github-actions[bot])
• CompatHelper: bump compat for OrdinaryDiffEq to 6 for package StiffODE, (keep existing compat) (#385) (@github-actions[bot])
• CompatHelper: bump compat for ModelingToolkit to 8 for package Bio, (keep existing compat) (#386) (@github-actions[bot])
• CompatHelper: bump compat for ModelingToolkit to 8 for package DAE, (keep existing compat) (#387) (@github-actions[bot])
• CompatHelper: bump compat for ModelingToolkit to 8 for package Jumps, (keep existing compat) (#388) (@github-actions[bot])
• CompatHelper: bump compat for ModelingToolkit to 8 for package PINNErrorsVsTime, (keep existing compat) (#389) (@github-actions[bot])
• CompatHelper: add new compat entry for Plots at version 1 for package PINNErrorsVsTime, (keep existing compat) (#390) (@github-actions[bot])
• CompatHelper: bump compat for ModelingToolkit to 8 for package PINNOptimizers, (keep existing compat) (#391) (@github-actions[bot])
• Try to generate doc pages (#392) (@ChrisRackauckas)
• Update the stiff ODE benchmarks (#394) (@ChrisRackauckas)
• Fix typo necesarly for necessarily (#395) (@traversaro)
• Parallel Extrapolation Methods Benchmarks (#396) (@utkarsh530)
• Show threads in test (#398) (@staticfloat)
• Bump stiff ODE benchmarks (#400) (@ChrisRackauckas)
• fix Van Der Pol (#401) (@ChrisRackauckas)
• CompatHelper: add new compat entry for GeometricIntegratorsDiffEq at version 0.2 for package StiffODE, (keep existing compat) (#402) (@github-actions[bot])
• CompatHelper: add new compat entry for SparsityDetection at version 0.3 for package StiffODE, (keep existing compat) (#403) (@github-actions[bot])
• Bump nonstiff ODE benchmarks (#405) (@ChrisRackauckas)
• fbdf update (#406) (@ChrisRackauckas)
• bump dae tests (#407) (@ChrisRackauckas)
• Continuing Extrapolation Improvements (#410) (@utkarsh530)
• [WIP][Don't Merge]Improvements in Parallel Extrapolation Benchmarks (#411) (@utkarsh530)
• Simpler BRUSS plot (#412) (@ChrisRackauckas)
• CompatHelper: add new compat entry for BenchmarkTools at version 1 for package StiffODE, (keep existing compat) (#415) (@github-actions[bot])
• CompatHelper: add new compat entry for ProfileSVG at version 0.2 for package StiffODE, (keep existing compat) (#416) (@github-actions[bot])
• CompatHelper: add new compat entry for LinearSolve at version 1 for package StiffODE, (keep existing compat) (#417) (@github-actions[bot])
• CompatHelper: bump compat for Flux to 0.13 for package PINNErrorsVsTime, (keep existing compat) (#418) (@github-actions[bot])
• CompatHelper: bump compat for Flux to 0.13 for package PINNOptimizers, (keep existing compat) (#419) (@github-actions[bot])
• Lock cryptic to v2, resign treehashes (#426) (@staticfloat)
• CompatHelper: bump compat for Catalyst to 12 for package Bio, (keep existing compat) (#429) (@github-actions[bot])
• CompatHelper: bump compat for Catalyst to 12 for package Jumps, (keep existing compat) (#430) (@github-actions[bot])
• CompatHelper: bump compat for DiffEqBayes to 3 for package ParameterEstimation, (keep existing compat) (#431) (@github-actions[bot])
• Update NonStiffODE benchmarks (#435) (@utkarsh530)
• update nonstiff benchmarks (#436) (@ChrisRackauckas)
• Update Parallel Extrapolation Benchmarks (#437) (@utkarsh530)
• Fix some benchmarks (#438) (@utkarsh530)
• try another nonstiff bump (#439) (@ChrisRackauckas)
• CompatHelper: add new compat entry for JLD2 at version 0.4 for package Bio, (keep existing compat) (#440) (@github-actions[bot])
• simplify BCR (#441) (@ChrisRackauckas)
• Bump to v1.7 and try stiff ODE (#442) (@ChrisRackauckas)
• bump DAE manifest (#443) (@ChrisRackauckas)
• bump nonstiff DDE (#444) (@ChrisRackauckas)
• bump nonstiff SDE (#445) (@ChrisRackauckas)
• bump stiff DDE (#446) (@ChrisRackauckas)
• bump stiff SDE (#447) (@ChrisRackauckas)
• bump jump equation benchmarks (#448) (@ChrisRackauckas)
• bump dynamical ode tests (#449) (@ChrisRackauckas)
• Include Rodas5 where it is significantly faster than Rodas4 (#452) (@utkarsh530)
• Bump NeuralPDE v5 benchmarks (#453) (@ChrisRackauckas)
• Set concurrency group for benchmark uploading (#454) (@staticfloat)
• CompatHelper: add new compat entry for IntegralsCuba at version 0.2 for package PINNErrorsVsTime, (keep existing compat) (#458) (@github-actions[bot])
• CompatHelper: add new compat entry for IntegralsCubature at version 0.2 for package PINNErrorsVsTime, (keep existing compat) (#459) (@github-actions[bot])
• CompatHelper: add new compat entry for Integrals at version 3 for package PINNErrorsVsTime, (keep existing compat) (#460) (@github-actions[bot])
• CompatHelper: add new compat entry for Lux at version 0.4 for package PINNErrorsVsTime, (keep existing compat) (#461) (@github-actions[bot])
• CompatHelper: add new compat entry for OptimizationFlux at version 0.1 for package PINNErrorsVsTime, (keep existing compat) (#462) (@github-actions[bot])
• CompatHelper: add new compat entry for Optimization at version 3 for package PINNErrorsVsTime, (keep existing compat) (#463) (@github-actions[bot])
• CompatHelper: add new compat entry for OptimizationOptimJL at version 0.1 for package PINNErrorsVsTime, (keep existing compat) (#464) (@github-actions[bot])
• CompatHelper: add new compat entry for OptimizationFlux at version 0.1 for package PINNOptimizers, (keep existing compat) (#465) (@github-actions[bot])
• CompatHelper: add new compat entry for Lux at version 0.4 for package PINNOptimizers, (keep existing compat) (#466) (@github-actions[bot])
• CompatHelper: add new compat entry for OptimizationOptimJL at version 0.1 for package PINNOptimizers, (keep existing compat) (#467) (@github-actions[bot])