Releases: SciML/SciMLBenchmarks.jl
Releases · SciML/SciMLBenchmarks.jl
v0.1.3
SciMLBenchmarks v0.1.3
v0.1.2
SciMLBenchmarks v0.1.2
Closed issues:
- PDE notebooks need to be rerun or re-linked (#53)
- No recompilation of Stan models in Bayesian benchmarks (#103)
- Make a Brusselator benchmark (#107)
- Re-run parameter estimation benchmarks (#129)
- Fix automated notebooks (#310)
- PINN solver benchmarks are broken (#353)
- Dynamical ODE benchmark HTML is too big (#455)
- Errors in precompilation (#469)
- Fixing the Stan binary for the Bayesian estimation (#484)
- Ensure Stan defaults used in benchmarks (#489)
- Stan and Turing.jl don't use the same HMC parameters (#492)
- Stan and Turing.jl don't sample from the same posteriors for the Bayesian parameter estimation benchmarks (#493)
- Newly added Gupta (bio) benchmarks links not working in the Readme (#498)
Merged pull requests:
- update parameter_estimation (#362) (@ChrisRackauckas)
- Jump benchmarks (#408) (@isaacsas)
- Add MethodOfLines Benchmark (#425) (@xtalax)
- bump nbody (#450) (@ChrisRackauckas)
- bump adaptive sde (#451) (@ChrisRackauckas)
- Use default names for algorithms in DDE benchmarks (#468) (@devmotion)
- bump DynamicalODE (#470) (@ChrisRackauckas)
- bump non-stiff SDE (#471) (@ChrisRackauckas)
- change sigmoid to tanh in PINNs' benchmarks (#473) (@YichengDWu)
- Bump Lotka-Volterra SDE (#474) (@ChrisRackauckas)
- CompatHelper: add new compat entry for StanSample at version 6 for package BayesianInference, (keep existing compat) (#476) (@github-actions[bot])
- CompatHelper: add new compat entry for DiffEqCallbacks at version 2 for package BayesianInference, (keep existing compat) (#477) (@github-actions[bot])
- CompatHelper: add new compat entry for Turing at version 0.21 for package BayesianInference, (keep existing compat) (#478) (@github-actions[bot])
- Attempt another Bayesian inference build (#485) (@ChrisRackauckas)
- Fix PDE definition for Nernst-Planck (#486) (@ChrisRackauckas)
- Add Gupta model benchmarks (#487) (@TorkelE)
- badges (#488) (@ArnoStrouwen)
- MassInstallAction: Install the Invalidations workflow on this repository (#490) (@devmotion)
- Add extrapolation benchmarks to new bio models (#491) (@utkarsh530)
- Try using a static direct Turing.jl version (#495) (@ChrisRackauckas)
- change adapt_delta to fit with Turing.jl (#497) (@EvoArt)
- bump a few packages (#499) (@ChrisRackauckas)
- Fix the Stan delta choice to match Turing (#500) (@ChrisRackauckas)
- CompatHelper: add new compat entry for StaticArrays at version 1 for package BayesianInference, (keep existing compat) (#501) (@github-actions[bot])
- Update gupta benchmarks (#502) (@TorkelE)
- update to v1.8 and update Bio to have nonstiff stuff (#504) (@ChrisRackauckas)
- Update stiff ODE benchmarks for Rodas5P and specializations (#505) (@ChrisRackauckas)
- update non-stiff ODEs to have static arrays and full specialization (#506) (@ChrisRackauckas)
- CompatHelper: add new compat entry for StaticArrays at version 1 for package NonStiffODE, (keep existing compat) (#507) (@github-actions[bot])
- Fix up Brusselator benchmark (#508) (@ChrisRackauckas)
- Create static versions of the problems for small stiff (#509) (@ChrisRackauckas)
- simplify static stiff (#510) (@ChrisRackauckas)
- Expand bruss benchmarks (#511) (@ChrisRackauckas)
- CompatHelper: add new compat entry for AlgebraicMultigrid at version 0.5 for package StiffODE, (keep existing compat) (#512) (@github-actions[bot])
- CompatHelper: add new compat entry for Symbolics at version 4 for package StiffODE, (keep existing compat) (#513) (@github-actions[bot])
- CompatHelper: add new compat entry for IncompleteLU at version 0.2 for package StiffODE, (keep existing compat) (#514) (@github-actions[bot])
- CompatHelper: add new compat entry for ModelingToolkit at version 8 for package StiffODE, (keep existing compat) (#515) (@github-actions[bot])
- Update problem library for StiffSDE (#516) (@ChrisRackauckas)
- update stiff dde (#517) (@ChrisRackauckas)
- update nonstiff sde (#518) (@ChrisRackauckas)
- update nonstiff dde (#519) (@ChrisRackauckas)
- update to jump problem library (#520) (@ChrisRackauckas)
- bump pde (#521) (@ChrisRackauckas)
- add fast bruss implemenation (#522) (@ChrisRackauckas)
- bump multisite and multistate (#523) (@ChrisRackauckas)
- Bump fceri (#524) (@ChrisRackauckas)
- CompatHelper: add new compat entry for LinearSolve at version 1 for package Bio, (keep existing compat) (#525) (@github-actions[bot])
- Adjust some of the new bio benchmarks to stop around steady state time (#526) (@ChrisRackauckas)
- Update Bio WP diagrams (#527) (@TorkelE)
- .buildkite: run_benchmark: use
v1
ofcoppermind
plugin (#529) (@thazhemadam) - Try new Bio build (#533) (@ChrisRackauckas)
- Fix typo in BCR (#534) (@ChrisRackauckas)
- full specialize in Bidkhori2012 (#535) (@ChrisRackauckas)
- remove extrapolation from sparse (#536) (@ChrisRackauckas)
- Fix preconditioner definitions (#537) (@ChrisRackauckas)
- Bump DynamicalODE (#539) (@ChrisRackauckas)
- Bump Bayes (#540) (@ChrisRackauckas)
- MOL move to analytic errors for burgers (#541) (@xtalax)
- CompatHelper: add new compat entry for MethodOfLines at version 0.7 for package MOLPDE, (keep existing compat) (#542) (@github-actions[bot])
- CompatHelper: add new compat entry for ModelingToolkit at version 8 for package MOLPDE, (keep existing compat) (#543) (@github-actions[bot])
- CompatHelper: add new compat entry for DomainSets at version 0.6 for package MOLPDE, (keep existing compat) (#544) (@github-actions[bot])
- CompatHelper: add new compat entry for Sundials at version 4 for package MethodOfLinesPDE, (keep existing compat) (#545) (@github-actions[bot])
- CompatHelper: add new compat entry for OrdinaryDiffEq at version 6 for package MethodOfLinesPDE, (keep existing compat) (#546) (@github-actions[bot])
- CompatHelper: add new compat entry for LinearSolve at version 1 for package MethodOfLinesPDE, (keep existing compat) (#547) (@github-actions[bot])
- CompatHelper: add new compat entry for MethodOfLines at version 0.7 for package StiffODE, (keep existing compat) (#553) (@github-actions[bot])
- CompatHelper: add new compat entry for DomainSets at version 0.6 for package StiffODE, (keep existing compat) (#554) (@github-actions[bot])
- Bump stiff Bio models (#558) (@ChrisRackauckas)
- Update buildkite tags and re-sign treehashes (#559) (@thazhemadam)
- Adds Coevolve aggregator to the Jumps benchmark suite (#565) (@gzagatti)
- ci: fix encrypted
repo_key
and sign treehashes (#568) (@thazhemadam) - Disable test checking for .html (#569) (@ChrisRackauckas)
- Fullspecialize on the Bio benchmarks (#572) (@ChrisRackauckas)
- update burgers mol package versions (should be working now) (#574) (@xtalax)
- add BCR benchmark summary figure (#577) (@TorkelE)
- improve Bio benchmarks (#581) (@TorkelE)
- Automatic benchmarking of various MOL discretizations across all of PDESystemLibrary (#583) (@xtalax)
- Adds Multivariate Hawkes benchmark. (#584) (@gzagatti)
- MultivariateHawkes: Do not run Python benchmark in the cloud (#585) (@gzagatti)
- enable dependabot for GitHub actions (#591) (@ranocha)
- Bump actions/checkout from 2 to 3 (#592) (@dependabot[bot])
- CompatHelper: bump compat for LinearSolve to 2 for package Bio, (keep existing compat) (#600) (@github-actions[bot])
- CompatHelper: bump compat for LinearSolve to 2 for package MethodOfLinesPDE, (keep existing compat) (#601) (@github-actions[bot])
- CompatHelper: bump compat for LinearSolve to 2 for package StiffODE, (keep existing compat) (#602) (@github-actions[bot])
v0.1.1
SciMLBenchmarks v0.1.1
Closed issues:
- Interesting benchmark problems (#35)
- Missing BCR (1122) benchmark page (#185)
- Fix DynamicalODE Benchmarks (#261)
- Fix Jumps Benchmarks (#262)
- Fix VanDerPol and ROBER notebooks (#325)
- Scale which benchmarking has been done? (#399)
- Jump process benchmarks are old (#456)
Merged pull requests:
- update DynamicalODE benchmarks (#229) (@ChrisRackauckas)
- update Jumps benchmarks (#230) (@ChrisRackauckas)
- fix liquid argon (#245) (@ChrisRackauckas)
- bump parameter estimation benchmarks (#246) (@ChrisRackauckas)
- bump non-stiff SDE benchmarks (#247) (@ChrisRackauckas)
- Update BCR.jmd (#249) (@ChrisRackauckas)
- CompatHelper: add new compat entry for "SciMLBenchmarks" at version "0.1" for package Bio (#251) (@github-actions[bot])
- CompatHelper: add new compat entry for "SciMLBenchmarks" at version "0.1" for package NBodySimulator (#252) (@github-actions[bot])
- CompatHelper: add new compat entry for "SciMLBenchmarks" at version "0.1" for package NonStiffDDE (#253) (@github-actions[bot])
- CompatHelper: add new compat entry for "SciMLBenchmarks" at version "0.1" for package NonStiffODE (#254) (@github-actions[bot])
- CompatHelper: add new compat entry for "SciMLBenchmarks" at version "0.1" for package NonStiffSDE (#255) (@github-actions[bot])
- CompatHelper: add new compat entry for "SciMLBenchmarks" at version "0.1" for package ParameterEstimation (#256) (@github-actions[bot])
- CompatHelper: add new compat entry for "SciMLBenchmarks" at version "0.1" for package StiffDDE (#257) (@github-actions[bot])
- CompatHelper: add new compat entry for "SciMLBenchmarks" at version "0.1" for package StiffODE (#258) (@github-actions[bot])
- CompatHelper: add new compat entry for "SciMLBenchmarks" at version "0.1" for package StiffSDE (#259) (@github-actions[bot])
- CompatHelper: add new compat entry for "SciMLBenchmarks" at version "0.1" for package Testing (#260) (@github-actions[bot])
- CompatHelper: add new compat entry for "SciMLBenchmarks" at version "0.1" for package AdaptiveSDE (#263) (@github-actions[bot])
- CompatHelper: add new compat entry for "SciMLBenchmarks" at version "0.1" for package DynamicalODE (#264) (@github-actions[bot])
- CompatHelper: add new compat entry for "SciMLBenchmarks" at version "0.1" for package AdaptiveSDE (#265) (@github-actions[bot])
- CompatHelper: add new compat entry for "SciMLBenchmarks" at version "0.1" for package Jumps (#266) (@github-actions[bot])
- CompatHelper: add new compat entry for "SciMLBenchmarks" at version "0.1" for package DynamicalODE (#267) (@github-actions[bot])
- CompatHelper: add new compat entry for "SciMLBenchmarks" at version "0.1" for package MOLPDE (#268) (@github-actions[bot])
- CompatHelper: add new compat entry for "SciMLBenchmarks" at version "0.1" for package Jumps (#269) (@github-actions[bot])
- CompatHelper: add new compat entry for "SciMLBenchmarks" at version "0.1" for package MultiLanguage (#270) (@github-actions[bot])
- CompatHelper: bump compat for "BlackBoxOptim" to "0.6" for package ParameterEstimation (#272) (@github-actions[bot])
- CompatHelper: bump compat for "BlackBoxOptim" to "0.6" for package ParameterEstimation (#273) (@github-actions[bot])
- update Jump benchmarks to use Catalyst.jl (#275) (@ChrisRackauckas)
- CompatHelper: bump compat for "BenchmarkTools" to "1.0" for package NBodySimulator (#276) (@github-actions[bot])
- CompatHelper: bump compat for "BenchmarkTools" to "1.0" for package ParameterEstimation (#277) (@github-actions[bot])
- Fix DynamicalODE Benchmarks (#278) (@SebastianM-C)
- update to add QNDF (#280) (@ChrisRackauckas)
- update BCR benchmarks (#281) (@ChrisRackauckas)
- Stop the autodiff explosion in BCR (#283) (@ChrisRackauckas)
- Update 2 of the Jumps benchmarks to use Catalyst (#286) (@Gregliest)
- Update README instructions. (#287) (@Gregliest)
- [WIP] Fix Diffusion benchmark. (#288) (@Gregliest)
- Fix Mendes Benchmark (#289) (@Gregliest)
- CompatHelper: add new compat entry for "ModelingToolkit" at version "5" for package Jumps (#290) (@github-actions[bot])
- CompatHelper: bump compat for "DiffEqJump" to "7" for package Jumps (#292) (@github-actions[bot])
- CompatHelper: bump compat for "Catalyst" to "7" for package Bio (#293) (@github-actions[bot])
- CompatHelper: bump compat for "Catalyst" to "7" for package Jumps (#294) (@github-actions[bot])
- CompatHelper: bump compat for "ReactionNetworkImporters" to "0.9" for package Bio (#295) (@github-actions[bot])
- CompatHelper: bump compat for "ModelingToolkit" to "6" for package Bio (#296) (@github-actions[bot])
- CompatHelper: bump compat for "ModelingToolkit" to "6" for package Jumps (#297) (@github-actions[bot])
- CompatHelper: bump compat for ReactionNetworkImporters to
0.10 for package Bio, (keep existing compat) (#299) (@github-actions[bot]) - CompatHelper: bump compat for Catalyst to
8 for package Bio, (keep existing compat) (#300) (@github-actions[bot]) - CompatHelper: bump compat for Catalyst to
8 for package Jumps, (keep existing compat) (#301) (@github-actions[bot]) - CompatHelper: bump compat for Catalyst to 8 for package Bio, (keep existing compat) (#302) (@github-actions[bot])
- CompatHelper: bump compat for ReactionNetworkImporters to 0.10 for package Bio, (keep existing compat) (#303) (@github-actions[bot])
- CompatHelper: bump compat for Catalyst to 8 for package Jumps, (keep existing compat) (#304) (@github-actions[bot])
- CompatHelper: bump compat for ReactionNetworkImporters to 0.11 for package Bio, (keep existing compat) (#305) (@github-actions[bot])
- CompatHelper: bump compat for Catalyst to 9 for package Bio, (keep existing compat) (#306) (@github-actions[bot])
- CompatHelper: bump compat for Catalyst to 9 for package Jumps, (keep existing compat) (#307) (@github-actions[bot])
- update BCR and its manifest (#308) (@isaacsas)
- Remove the pdf and notebook defaults (#311) (@ChrisRackauckas)
- CompatHelper: bump compat for Catalyst to 10 for package Jumps, (keep existing compat) (#313) (@github-actions[bot])
- CompatHelper: bump compat for ModelingToolkit to 7 for package Bio, (keep existing compat) (#315) (@github-actions[bot])
- CompatHelper: bump compat for ModelingToolkit to 7 for package Jumps, (keep existing compat) (#316) (@github-actions[bot])
- CompatHelper: bump compat for DiffEqJump to 8 for package Jumps, (keep existing compat) (#317) (@github-actions[bot])
- CompatHelper: bump compat for ReactionNetworkImporters to 0.12 for package Bio, (keep existing compat) (#318) (@github-actions[bot])
- Update bcr for defaults (#320) (@isaacsas)
- Add FBDF to the benchmarks (#321) (@YingboMa)
- Move CI to
juliaecosystem
(#322) (@staticfloat) - No pdf (#323) (@ChrisRackauckas)
- fix test, again (#324) (@ChrisRackauckas)
- Fix VanderPol and Rober benchmark (#326) (@junpenggao233)
- Add NeuralPDE Paper Benchmarks (#327) (@ChrisRackauckas)
- CompatHelper: add new compat entry for QuasiMonteCarlo at version 0.2 for package PINNErrorsVsTime, (keep existing compat) (#328) (@github-actions[bot])
- CompatHelper: add new compat entry for Cuba at version 2 for package PINNErrorsVsTime, (keep existing compat) (#329) (@github-actions[bot])
- CompatHelper: add new compat entry for Optim at version 1 for package PINNErrorsVsTime, (keep existing compat) (#330) (@github-actions[bot])
- CompatHelper: add new compat entry for DiffEqFlux at version 1 for package PINNErrorsVsTime, (keep existing compat) (#331) (@github-actions[bot])
- CompatHelper: add new compat entry for NeuralPDE at version 4 for package PINNErrorsVsTime, (keep existing compat) (#332) (@github-actions[bot])
- CompatHelper: add new compat entry for Quadrature at version 1 for package PINNErrorsVsTime, (keep existing compat) (#333) (@github-actions[bot])
- CompatHelper: add new compat entry for Flux at version 0.12 for package PINNErrorsVsTime, (keep existing compat) (#334) (@github-actions[bot])
- CompatHelper: add new compat entry for ModelingToolkit at version 7 for package PINNErrorsVsTime, (keep existing compat) (#335) (@github-actions[bot])
- CompatHelper: add new compat entry for Cubature at version 1 for package PINNErrorsVsTime, (keep existing compat) (#336) (@github-actions[bot])
- CompatHelper: add new compat entry for GalacticOptim at version 2 for package PINNErrorsVsTime, (keep existing compat) (#337) (@github-actions[bot])
- CompatHelper: add new compat entry for NeuralPDE at version 4 for package PINNOptimizers, (keep existing compat) (#338) (@github-actions[bot])
- CompatHelper: add new compat entry for Plots at version 1 for package PINNOptimizers, (keep existing compat) (#339) (@github-actions[bot])
- CompatHelper: add new compat entry for GalacticOptim at version 2 for package PINNOptimizers, (keep existing compat) (#340) (@github-actions[bot])
- CompatHelper: add new compat entry for DiffEqFlux at version 1 for package PINNOptimizers, (keep existing compat) (#341) (@github-actions[bot])
- CompatHelper: add new compat entry for Cubature at version 1 for package PINNOptimizers, (keep existing compat) (#342) (@github-actions[bot])
- CompatHelper: add new compat entry for Cuba at version 2 for package PINNOptimizers, (keep existing compat) (#343) (@github-actions[bot])
- CompatHelper: add new compat entry for ModelingToolkit at version 7 for package PINNOptimizers, (keep existing compat) (#344) (@github-actions[bot])
- CompatHelper: add new compat entry for Optim at version 1 for package PINNOptimizers, (keep existing compat) (#345) (@github-actions[bot])
- CompatHelper: add new compat entry for Quadrature at version 1 for package PINNOptimizers, (keep existing compat) (#346) (@github-actions[bot])
- CompatHelper: add new compat entry for Flux at version 0.12 for package PINNOptimizers, (keep existing compat) (#347) (@github-actions[bot])
- Fix a bunch of PINN benchmarks (#348) (@ChrisRackauckas)
- CompatHelper...
v0.1.0
SciMLBenchmarks v0.1.0
Closed issues:
- Pictures (#1)
- Benchmarks for Dynamical ODEs (#2)
- Benchmarks for DDEs (#3)
- Benchmarks for stiff SDEs (#5)
- Issue with DiffEqBase in LorenzParameter Estimation (#13)
- Benchmarks for SSA/jump systems (#25)
- Convert benchmarks to use Weave.jl (#29)
- Benchmarks for ExpRK methods (#30)
- Wheldon, Kirk, and Finlay (#33)
- Regressions from v1.0 upgrade (#37)
- Weak SDE estimation is currently broken (#40)
- DiffEqBayesLorenz and DiffEqBayesLotkaVolterra need to be re-ran (#41)
- Filament needs to be fixed (#42)
- Jump equations need to run (#43)
- Oval2 Timings need an update (#46)
- BCR import location (#55)
- Pleiades (#95)
- Precompilation broken on julia 1.5 beta1 (#105)
- Build log (#116)
- Re-run stiff ODE benchmarks (#128)
- Re-run DynamicalODE benchmarks (#131)
- update BCR benchmark for Catalyst (#169)
Merged pull requests:
- Add benchmarks of constant delay DDEs (#4) (@devmotion)
- Add DynamicalODE (#7) (@SebastianM-C)
- Update DDE benchmarks (#8) (@devmotion)
- Fix DDE interpolation and add Rodas5 to QS (#9) (@devmotion)
- Update DynamicalODE (#10) (@SebastianM-C)
- Added notebooks for DiffEqBayes benchmarking (#11) (@Vaibhavdixit02)
- Modifications to summary and update to new syntax (#12) (@Vaibhavdixit02)
- DiffEqBayes Benchmarks for LV and Lorenz equation (#16) (@Vaibhavdixit02)
- Use plot_chain for turing_inference (#18) (@Vaibhavdixit02)
- Notebook for Lotka Volterra parameter estimation with optimisation methods (#19) (@Vaibhavdixit02)
- Update the Readme summary and typo in Lorenz notebook (#20) (@Vaibhavdixit02)
- FitzHugh-Nagumo Parameter estimation using optimization methods. (#21) (@Vaibhavdixit02)
- Updates to Readme and some changes in LV notebook (#22) (@Vaibhavdixit02)
- Added QuadDIRECT to the optimization methods benchmarks for parameter estimation (#23) (@Vaibhavdixit02)
- jump benchmarks (#26) (@isaacsas)
- RFC: Restructure benchmarks to use Weave instead of notebooks (#32) (@ChrisRackauckas)
- Update parameter estimation benchmarks (#36) (@Vaibhavdixit02)
- Add Project.toml (#38) (@asinghvi17)
- Benchmark jmd files for ROCK2 and ROCK4 (#39) (@deeepeshthakur)
- Updated the filament benchmark (#44) (@dextorious)
- added four differential equations (#45) (@HH3117)
- created the PDE folder (#48) (@HH3117)
- add extrapolation methods (#49) (@saurabhkgp21)
- Update DiffEqBayesLotkaVolterra.jl for breaking uncertainity/uncertainty typo (#50) (@jamesjscully)
- BCR chemical reaction system benchmarks (#52) (@ChrisRackauckas)
- Update jump benchmarks (#54) (@isaacsas)
- CompatHelper: add new compat entry for "DataFrames" at version "0.19" (#57) (@github-actions[bot])
- CompatHelper: add new compat entry for "RecursiveFactorization" at version "0.1" (#58) (@github-actions[bot])
- CompatHelper: add new compat entry for "ReactionNetworkImporters" at version "0.1" (#59) (@github-actions[bot])
- CompatHelper: add new compat entry for "IJulia" at version "1.20" (#60) (@github-actions[bot])
- CompatHelper: add new compat entry for "BlackBoxOptim" at version "0.5" (#61) (@github-actions[bot])
- CompatHelper: add new compat entry for "DiffEqDevTools" at version "2.15" (#62) (@github-actions[bot])
- CompatHelper: add new compat entry for "ParameterizedFunctions" at version "4.2" (#63) (@github-actions[bot])
- CompatHelper: add new compat entry for "DiffEqJump" at version "6.2" (#64) (@github-actions[bot])
- CompatHelper: add new compat entry for "Weave" at version "0.9" (#65) (@github-actions[bot])
- CompatHelper: add new compat entry for "ApproxFun" at version "0.11" (#66) (@github-actions[bot])
- CompatHelper: add new compat entry for "ODEInterfaceDiffEq" at version "3.4" (#67) (@github-actions[bot])
- CompatHelper: add new compat entry for "OrdinaryDiffEq" at version "5.23" (#68) (@github-actions[bot])
- CompatHelper: add new compat entry for "ODEInterface" at version "0.4" (#69) (@github-actions[bot])
- CompatHelper: add new compat entry for "ODE" at version "2.5" (#70) (@github-actions[bot])
- CompatHelper: add new compat entry for "DiffEqProblemLibrary" at version "4.5" (#71) (@github-actions[bot])
- CompatHelper: add new compat entry for "DiffEqUncertainty" at version "1.3" (#72) (@github-actions[bot])
- CompatHelper: add new compat entry for "LSODA" at version "0.6" (#73) (@github-actions[bot])
- CompatHelper: add new compat entry for "DiffEqBiological" at version "4.0" (#74) (@github-actions[bot])
- CompatHelper: add new compat entry for "SteadyStateDiffEq" at version "1.5" (#75) (@github-actions[bot])
- CompatHelper: add new compat entry for "Sundials" at version "3.8" (#76) (@github-actions[bot])
- CompatHelper: add new compat entry for "NLopt" at version "0.5" (#77) (@github-actions[bot])
- CompatHelper: add new compat entry for "DiffEqParamEstim" at version "1.8" (#78) (@github-actions[bot])
- CompatHelper: add new compat entry for "Plots" at version "0.27" (#79) (@github-actions[bot])
- CompatHelper: add new compat entry for "NLopt" at version "0.5" (#80) (@github-actions[bot])
- Save all figures as SVG (#81) (@asinghvi17)
- Default html to svg (#82) (@ChrisRackauckas)
- CompatHelper: bump compat for "Plots" to "0.28" (#83) (@github-actions[bot])
- CompatHelper: bump compat for "DataFrames" to "0.20" (#84) (@github-actions[bot])
- Update BCR benchmark to use correct path (#85) (@isaacsas)
- CompatHelper: add new compat entry for "DiffEqBase" at version "6.7" (#86) (@github-actions[bot])
- CompatHelper: add new compat entry for "DifferentialEquations" at version "6.9" (#87) (@github-actions[bot])
- CompatHelper: add new compat entry for "ParallelDataTransfer" at version "0.5" (#88) (@github-actions[bot])
- Myb/noauto (#89) (@ChrisRackauckas)
- CompatHelper: bump compat for "Plots" to "0.29" (#92) (@github-actions[bot])
- Install TagBot as a GitHub Action (#93) (@JuliaTagBot)
- CompatHelper: bump compat for "ParameterizedFunctions" to "5.0" (#94) (@github-actions[bot])
- CompatHelper: bump compat for "Plots" to "1.0" (#96) (@github-actions[bot])
- CompatHelper: bump compat for "Sundials" to "4.0" (#97) (@github-actions[bot])
- Update DiffEqBayes benchmarks (#98) (@Vaibhavdixit02)
- CompatHelper: add new compat entry for "DiffEqBayes" at version "2.9" (#99) (@github-actions[bot])
- CompatHelper: bump compat for "DataFrames" to "0.21" (#100) (@github-actions[bot])
- Use
truncated
instead ofTruncated
(#101) (@devmotion) - CompatHelper: bump compat for "NLopt" to "0.6" (#102) (@github-actions[bot])
- Add NBodySimulator benchmarks (#106) (@SebastianM-C)
- Rebuild benchmarks (#108) (@christopher-dG)
- Move to separate projects (#109) (@christopher-dG)
- CompatHelper: bump compat for "DiffEqNoiseProcess" to "5.0" for package AdaptiveSDE (#110) (@github-actions[bot])
- CompatHelper: bump compat for "DiffEqMonteCarlo" to "1.0" for package AdaptiveSDE (#111) (@github-actions[bot])
- CompatHelper: bump compat for "DiffEqNoiseProcess" to "5.0" for package StiffSDE (#112) (@github-actions[bot])
- Rebuild StiffSDE/QuadraticStiffness.jmd (#114) (@github-actions[bot])
- Activate project env (#115) (@christopher-dG)
- Rebuild NonStiffODE/FitzhughNagumo_wpd.jmd, NonStiffODE/LotkaVolterra_wpd.jmd, NonStiffODE/Pleiades_wpd.jmd, NonStiffODE/RigidBody_wpd.jmd, NonStiffODE/ThreeBody_wpd.jmd, NonStiffODE/linear_wpd.jmd (#117) (@github-actions[bot])
- Rebuild Jumps/Diffusion_CTRW.jmd, Jumps/Mendes_multistate_example.jmd, Jumps/NegFeedback_GeneExpr.jmd, Jumps/NegFeedback_GeneExpr_Marchetti.jmd (#119) (@github-actions[bot])
- Rebuild StiffSDE/Oval2LongRun.jmd, StiffSDE/Oval2LongTimes.jmd, StiffSDE/Oval2Timings.jmd, StiffSDE/QuadraticStiffness.jmd, StiffSDE/StochasticHeat.jmd (#123) (@github-actions[bot])
- Rebuild NonStiffDDE/Mackey_Glass_wpd.jmd, NonStiffDDE/Wheldon_Kirk_Finlay_wpd.jmd (#125) (@github-actions[bot])
- Rebuild StiffDDE/QuorumSensing.jmd (#127) (@github-actions[bot])
- Rebuild StiffSDE/StochasticHeat.jmd (#133) (@github-actions[bot])
- Rebuild Jumps/Mendes_multistate_example.jmd (#134) (@github-actions[bot])
- Rebuild NonStiffDDE/Mackey_Glass_wpd.jmd (#135) (@github-actions[bot])
- Avoid module usage (#136) (@SebastianM-C)
- Add missing package (#139) (@SebastianM-C)
- CompatHelper: add new compat entry for "StatsPlots" at version "0.14" for package NBodySimulator (#140) (@github-actions[bot])
- CompatHelper: add new compat entry for "StaticArrays" at version "0.12" for package NBodySimulator (#141) (@github-actions[bot])
- CompatHelper: add new compat entry for "Plots" at version "1.5" for package NBodySimulator (#142) (@github-actions[bot])
- CompatHelper: add new compat entry for "OrdinaryDiffEq" at version "5.41" for package NBodySimulator (#143) (@github-actions[bot])
- CompatHelper: add new compat entry for "ProgressLogging" at version "0.1" for package NBodySimulator (#144) (@github-actions[bot])
- CompatHelper: add new compat entry for "DataFrames" at version "0.21" for package NBodySimulator (#145) (@github-actions[bot])
- CompatHelper: add new compat entry for "NBodySimulator" at version "1.3" for package NBodySimulator (#146) (@github-actions[bot])
- CompatHelper: add new compat entry for "BenchmarkTools" at version "0.5" for package NBodySimulator (#147) (@github-actions[bot])
- Rebuild NonStiffODE/ThreeBody_wpd.jmd (#149) (@github-actions[bot])
- Finish renaming DiffEqBenchmarks -> SciMLBenchmarks (#150) (@christopher-dG)
- Rebuild MOLPDE/ks_spectral_wpd.jmd (#153) (@github-actions[bot])
- Rebuild MOLPDE/burgers_spectral_wpd.jmd (#154) (@github-actions[bot])
- Rebuild StiffDDE/QuorumSensing.jmd (#156) (@github-actions[bot])
- Special case for TaylorIntegration (#157) (@SebastianM-C)
- Rebuild NonStiffODE/LotkaVolterra_wpd.jmd (#159) (@github-actions[bot])
- CompatHelper: bump compat for "ReactionNetworkImporters" to "0.2" for package StiffODE (#161) (@github-actions[bot])
- CompatHelper: bump compat for "ApproxFun" to "0.12" for package MOLPDE (#162) (@github-actions[bot])
- CompatHelper: bump compat for "Distribution...