Merge pull request #417 from NeuroML/experimental

To v1.3.7 & use jnml v0.13.3
NeuroML · Aug 19, 2024 · 9f0c26f · 9f0c26f
2 parents 2ea1d7c + 79eea48
commit 9f0c26f
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Showing 5 changed files with 6 additions and 3 deletions.
diff --git a/pyneuroml/__init__.py b/pyneuroml/__init__.py
@@ -12,7 +12,7 @@
     __version__ = importlib_metadata.version("pyNeuroML")
 
 
-JNEUROML_VERSION = "0.13.2"
+JNEUROML_VERSION = "0.13.3"
 
 # Define a logger for the package
 logging.basicConfig(

diff --git a/pyneuroml/lib/jNeuroML-0.13.1-jar-with-dependencies.jar b/pyneuroml/lib/jNeuroML-0.13.1-jar-with-dependencies.jar
diff --git a/...jNeuroML-0.13.2-jar-with-dependencies.jar → ...jNeuroML-0.13.3-jar-with-dependencies.jar b/...jNeuroML-0.13.2-jar-with-dependencies.jar → ...jNeuroML-0.13.3-jar-with-dependencies.jar
diff --git a/pyneuroml/xppaut/__init__.py b/pyneuroml/xppaut/__init__.py
@@ -250,10 +250,13 @@ def substitute_functions(expr, functions):
 def to_xpp(data, new_xpp_filename):
     xpp_ode = ""
 
+    from pyneuroml import __version__
+    xpp_ode += "\n## XPP export from pyNeuroML v%s\n"%__version__
+
     xpp_ode += "\n# Parameters\n"
     for k, v in data["parameters"].items():
         if k not in INBUILT.keys():
-            xpp_ode += f"par {k} = {v}\n"
+            xpp_ode += f"par {k}={v}\n"
 
     xpp_ode += "\n# Functions\n"
     for k, v in data["functions"].items():

diff --git a/setup.cfg b/setup.cfg
@@ -1,6 +1,6 @@
 [metadata]
 name = pyNeuroML
-version = 1.3.6
+version = 1.3.7
 author = Padraig Gleeson
 author_email = [email protected]
 url = https://github.com/NeuroML/pyNeuroML