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KomaMRI v0.7.4: Bug fixes and minor features #163

Merged
merged 142 commits into from
Jul 12, 2023
Merged

KomaMRI v0.7.4: Bug fixes and minor features #163

merged 142 commits into from
Jul 12, 2023

Commits on Mar 9, 2023

  1. Edit UI for more name consistency

    @beorostica
    beorostica committed Mar 9, 2023
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Commits on Mar 22, 2023

  1. Export to .mat on every GUI window

    @beorostica
    beorostica committed Mar 22, 2023
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Commits on Apr 4, 2023

  1. Change GUI style and add sidebar button for exporting to .mat

    @beorostica
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  2. Remove export to .mat buttons on the plots

    @beorostica
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  3. Add update logic for object names

    @beorostica
    beorostica committed Apr 4, 2023
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  4. Add loading logic

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    beorostica committed Apr 4, 2023
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Commits on Apr 20, 2023

  1. Select folder to save data (downgrade InteractBase)

    @beorostica
    beorostica committed Apr 20, 2023
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Commits on Apr 26, 2023

  1. Koma v0.7.4

    @cncastillo
    cncastillo committed Apr 26, 2023
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Commits on Apr 27, 2023

  1. Use savefile to save .mat files

    @beorostica
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  2. Add view for scanner parameters

    @beorostica
    beorostica committed Apr 27, 2023
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  3. Change logo size

    @beorostica
    beorostica committed Apr 27, 2023
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  4. Merge branch 'gui' into koma_v074

    @beorostica
    beorostica committed Apr 27, 2023
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  5. Fix head bug

    @beorostica
    beorostica committed Apr 27, 2023
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Commits on Apr 28, 2023

  1. Add tests for plotting M1 M2 and eddy-currents

    @beorostica
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  2. Add plots for M1 and M2 in GUI

    @beorostica
    beorostica committed Apr 28, 2023
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Commits on May 2, 2023

  1. KomaMRIPlots: 

    Plot Eddy current spectra,
and colored sim blocks in plot_seq
    @cncastillo
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  2. Added a space.

    @cncastillo
    cncastillo committed May 2, 2023
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  3. Fixed typo.

    @cncastillo
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  4. Added eps rise/fall time to square RFs in get_rfs

    @cncastillo
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  5. Added discretize func, 

    is_X_on now considers 1:end-1.
    @cncastillo
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  6. Cleaned sim params andseq discretization. 

    Modified how blocks are handled (get_sim_ranges).
    @cncastillo
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  7. seqd.ADC is now sampled at t_i (before t_i+1)

    @cncastillo
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  8. New plot_seqd, 

    new sim block plotting,
changed how `t` is handled.
    @cncastillo
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  9. New get_sim_ranges function. EPS = 1e-10.

    @cncastillo
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  10. T2prep and FatSat considered for RR delay cal.

    @cncastillo
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  11. Added gap before RF and EC spectra from scanner.

    @cncastillo
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  12. Minor changes.

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Commits on May 3, 2023

  1. Merge koma_v074 into gui

    @beorostica
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  2. Add message when loading

    @beorostica
    beorostica committed May 3, 2023
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  3. Export M0, M1 and M2 to .mat

    @beorostica
    beorostica committed May 3, 2023
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  4. Change logo margin on sidebar

    @beorostica
    beorostica committed May 3, 2023
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Commits on May 4, 2023

  1. FatSat to Gauss pulse.

    @cncastillo
    cncastillo committed May 4, 2023
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  2. Fixes bug with sim in the CPU.

    @cncastillo
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  3. Test comparing sim accuracy against Mathematica

    @cncastillo
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  4. Tests for M1 and M2 plots.

    @cncastillo
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  5. plot_seqd now has default simParams

    @cncastillo
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  6. Fixes + of Sequence and ADC/Grad/RF in Julia 1.6

    @cncastillo
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  7. Cleaned plotting functions, TODO: kspace, phantom

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Commits on May 5, 2023

  1. Edit displayed phrases, some colors, logo size and use loading.html

    @beorostica
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  2. Remove image and workingdirectory names and use .seq .h5 .scanner and… 

    … .mrd
    @beorostica
    beorostica committed May 5, 2023
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  3. Add Toast messages for saving to .mat instead of loading progress bar

    @beorostica
    beorostica committed May 5, 2023
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  4. Move .mat export functions to a dedicated file

    @beorostica
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  5. Merge branch koma_v074 into gui

    @beorostica
    beorostica committed May 5, 2023
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  6. Solve last merging conflicts

    @beorostica
    beorostica committed May 5, 2023
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  7. Update ci.yaml

    @beorostica
    beorostica committed May 5, 2023
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Commits on May 8, 2023

  1. Update again ci.yaml

    @beorostica
    beorostica committed May 8, 2023
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  2. Update ci.yml again

    @beorostica
    beorostica committed May 8, 2023
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  3. Update ci.yml again

    @beorostica
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  4. Removed waits (1s).

    @cncastillo
    cncastillo committed May 8, 2023
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  5. Changed logo size and toast dur.

    @cncastillo
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  6. Submodule dependancy setup for tests

    @cncastillo
    cncastillo committed May 8, 2023
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  7. Added KomaMRICore compat in KomaMRIPlots.

    @cncastillo
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  8. Changed the order of KomaCore and KomaPlots tests

    @cncastillo
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  9. Dev deps and build submodule projects

    @cncastillo
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  10. Update ci.yml

    @beorostica
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  11. Changed project for KomaMRIPlots test

    @cncastillo
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  12. Removed quotes from project directory in test

    @cncastillo
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  13. Changed KomaPlots dev setup

    @cncastillo
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Commits on May 10, 2023

  1. Added CUDA 4 compat

    @cncastillo
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  2. KomaUI only returns Window if dev_tools=true

    @cncastillo
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  3. Added KomaUI test

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  4. Added prefix: xvfb-run to KomaMRI tests

    @cncastillo
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  5. Changed devTools to dev_tools

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  6. Only use xvfb-run in Ubuntu.

    @cncastillo
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  7. Fixed tests for ubuntu, new [skip ci] commit arg

    @cncastillo
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  8. Removed xvfb for KomaCore (no plots nor UI)

    @cncastillo
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  9. Fixed julia 1.6 bug in UI

    @cncastillo
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  10. CI test

    @cncastillo
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  11. CI test 2

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Commits on May 11, 2023

  1. Add tests for exporting to .mat files

    @beorostica
    beorostica committed May 11, 2023
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  2. Update ci.yml for 1.8 julia version

    @beorostica
    beorostica committed May 11, 2023
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  3. Remove CUDA 4 compat

    @beorostica
    beorostica committed May 11, 2023
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  4. Use CI with KomaMRI development setup

    @beorostica
    beorostica committed May 11, 2023
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  5. Add tests for KomaMRI and use CI latest version

    @beorostica
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  6. Add test for plot_seqd

    @beorostica
    beorostica committed May 11, 2023
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  7. Add simple tests for GUI

    @beorostica
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  8. Use KomaMRIPlots development for testing KomaMRI in CI

    @beorostica
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  9. Fix range bug for julia 1.6

    @beorostica
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Commits on May 15, 2023

  1. Edit some KomaMRIPlosts tests

    @beorostica
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Commits on May 19, 2023

  1. Update tests and docstrings for scanner struct

    @beorostica
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  2. Update tests for Phantom struct

    @beorostica
    beorostica committed May 19, 2023
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  3. Update tests for Delay struct

    @beorostica
    beorostica committed May 19, 2023
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Commits on May 22, 2023

  1. Update some tests for ADC struct

    @beorostica
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  2. Remove almost completely the "other" folder

    @beorostica
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Commits on May 23, 2023

  1. Update tests for Grad struct

    @beorostica
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  2. Update tests for RF struct

    @beorostica
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  3. Update tests for RF struct

    @beorostica
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  4. Update tests for RF struct

    @beorostica
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  5. Remove some unused functions from the Sequence struct

    @beorostica
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  6. Add tests for IO MRiLab

    @beorostica
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Commits on May 24, 2023

  1. Add tests for IO ISMRMRD

    @beorostica
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  2. Fix MRiLab for julia 1.6

    @beorostica
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  3. Update README.md [skip ci]

    @cncastillo
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  4. Add simple tests for DiscretSequence

    @beorostica
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  5. Add simple tests for Spinor struct

    @beorostica
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  6. Add simple tests for Sequence functions

    @beorostica
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  7. Add simple tests for Sequence math operations

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  8. Fix bug when deleting some lines in the past commit

    @beorostica
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Commits on Jun 1, 2023

  1. Add simple tests for BlochDict

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Commits on Jun 2, 2023

  1. Edit according to reviews from cncastillo

    @beorostica
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  2. Remove test file

    @beorostica
    beorostica committed Jun 2, 2023
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  3. Fix bug for Phantom test

    @beorostica
    beorostica committed Jun 2, 2023
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Commits on Jun 21, 2023

  1. Removed InteractBase from deps.

    @cncastillo
    cncastillo committed Jun 21, 2023
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  2. Updated some examples.

    @cncastillo
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  3. Eddy currents are in T/m now.

    @cncastillo
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  4. KomaMRIPlots: 

    +plot_slew_rate
+plot_eddy_currents
    @cncastillo
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  5. Commented out savedialog in KomaUI. 

    Removed UI tests, they must be done with sim clicks.
    @cncastillo
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Commits on Jun 22, 2023

  1. Commentout for avoiding to use savedialog

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Commits on Jun 27, 2023

  1. Remove InteractBase from Project.toml

    @beorostica
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  2. Change some filenames when exporting to .mat

    @beorostica
    beorostica committed Jun 27, 2023
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  3. Merge koma_v074

    @beorostica
    beorostica committed Jun 27, 2023
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  4. Test clicks in the GUI

    @beorostica
    beorostica committed Jun 27, 2023
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Commits on Jun 28, 2023

  1. Merge pull request #171 from cncastillo/avoid-dialog 

    Avoid dialog
    @cncastillo
    cncastillo authored Jun 28, 2023
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Commits on Jun 29, 2023

  1. Make Blink test synchronous and close window

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    beorostica committed Jun 29, 2023
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Commits on Jun 30, 2023

  1. Add try-catch for testing KomaUI

    @beorostica
    beorostica committed Jun 30, 2023
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  2. Back to synchronous for testing KomaUI

    @beorostica
    beorostica committed Jun 30, 2023
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  3. Test KomaUI without calling Blink

    @beorostica
    beorostica committed Jun 30, 2023
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  4. Fix: Test KomaUI without calling Blink

    @beorostica
    beorostica committed Jun 30, 2023
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  5. Fix: KomaUI test

    @beorostica
    beorostica committed Jun 30, 2023
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Commits on Jul 5, 2023

  1. Test .click() for KomaUI tests on remote

    @beorostica
    beorostica committed Jul 5, 2023
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Commits on Jul 6, 2023

  1. Test .click() for julia 1.6

    @beorostica
    beorostica committed Jul 6, 2023
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  2. Test .click() sleep time for for julia 1.6

    @beorostica
    beorostica committed Jul 6, 2023
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  3. Test timeout function for KomaUI on remote

    @beorostica
    beorostica committed Jul 6, 2023
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  4. Filter test .click() according to julia version

    @beorostica
    beorostica committed Jul 6, 2023
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  5. Complete filter test

    @beorostica
    beorostica committed Jul 6, 2023
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  6. Test KomaUI with Window() outside @testset

    @beorostica
    beorostica committed Jul 6, 2023
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Commits on Jul 10, 2023

  1. Test KomaUI() click buttons

    @beorostica
    beorostica committed Jul 10, 2023
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  2. Remove const global variables for testing KomaUI() click buttons

    @beorostica
    beorostica committed Jul 10, 2023
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  3. Test get_breaks_in_RF_key_points() function

    @beorostica
    beorostica committed Jul 10, 2023
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  4. Make test for get_breaks_in_RF_key_points() more readable

    @beorostica
    beorostica committed Jul 10, 2023
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  5. Update button hidden content at the end of button handlers

    @beorostica
    beorostica committed Jul 10, 2023
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Commits on Jul 11, 2023

  1. Add test for plot_slew_rate() function in KomaMRIPlots

    @beorostica
    beorostica committed Jul 11, 2023
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  2. Test for simulation and reconstuction buttons

    @beorostica
    beorostica committed Jul 11, 2023
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  3. Add timeout condition for testing KomaUI()

    @beorostica
    beorostica committed Jul 11, 2023
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  4. Change camelCase format in ExportMATFunctions

    @beorostica
    beorostica committed Jul 11, 2023
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Commits on Jul 12, 2023

  1. Add for loop for testing KomaUI window

    @beorostica
    beorostica committed Jul 12, 2023
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  2. Edit export-to-mat tests in KomaUI

    @beorostica
    beorostica committed Jul 12, 2023
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  3. Fixed Grad fwf printing bug

    @cncastillo
    cncastillo committed Jul 12, 2023
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  4. Generalized gradients in DiffMRF

    @cncastillo
    cncastillo committed Jul 12, 2023
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  5. Changed name of function in KomaUI tests.

    @cncastillo
    cncastillo committed Jul 12, 2023
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  6. Add and test isapprox() functions

    @beorostica
    beorostica committed Jul 12, 2023
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  7. Updated README [skip ci]

    @cncastillo
    cncastillo committed Jul 12, 2023
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