A community-maintained repository of cancer clinical knowledge bases and databases focused on cancer variants.

Personal Cancer Genome Reporter (PCGR)

Lollipop-style mutation diagrams for annotating genetic variations.

Framework to process and call somatic variation from NGS dataset generated using MSK-IMPACT assay

DeTiN is designed to measure tumor-in-normal contamination and improve somatic variant detection sensitivity when using a contaminated matched control.

A PyTorch implementation for differentiating between different types of lymphoma cancer

Python library and package for mutational analysis

Classify the given genetic variations/mutations based on evidence from text-based clinical literature.

Code for figure generation and analysis in Finding driver mutations in cancer: Elucidating the role of background mutational processes https://doi.org/10.1371/journal.pcbi.1006981