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| This is a feature and bug fix release with no breaking changes and no change to | ||
| worse in any of the reverse dependencies | ||
| This is a patch release partly in response to a request from CRAN. No | ||
| user-facing changes and no breakage in reverse dependencies detected | ||
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| ## Test environments | ||
| * local R installation, R 4.0.1 | ||
| * ubuntu 16.04 (on travis-ci), R 4.0.1 | ||
| * local R installation, R 4.0.3 | ||
| * ubuntu 16.04 (on travis-ci), R 4.0.3 | ||
| * win-builder (devel) | ||
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| ## R CMD check results | ||
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| 0 errors | 0 warnings | 1 note | ||
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| * This is a new release. | ||
| 0 errors | 0 warnings | 0 note | ||
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| ## revdepcheck results | ||
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| We checked 46 reverse dependencies (45 from CRAN + 1 from BioConductor), comparing R CMD check results across CRAN and dev versions of this package. | ||
| We checked 47 reverse dependencies, comparing R CMD check results across CRAN and dev versions of this package. | ||
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| * We saw 0 new problems | ||
| * We failed to check 1 packages | ||
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| Issues with CRAN packages are summarised below. | ||
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| ### Failed to check | ||
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| * Seurat (NA) | ||
| * We failed to check 0 packages |
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| # Revdeps | ||
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| ## Failed to check (2) | ||
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| |package |version |error |warning |note | | ||
| |:-------|:-------|:-----|:-------|:----| | ||
| |NA |? | | | | | ||
| |Seurat |? | | | | | ||
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| # NA | ||
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| <details> | ||
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| * Version: NA | ||
| * Source code: https://github.com/cran/NA | ||
| * Number of recursive dependencies: 0 | ||
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| Run `cloud_details(, "NA")` for more info | ||
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| </details> | ||
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| ## Error before installation | ||
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| ### Devel | ||
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| ``` | ||
| ``` | ||
| ### CRAN | ||
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| ``` | ||
| ``` | ||
| # Seurat | ||
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| <details> | ||
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| * Version: 3.2.2 | ||
| * Source code: https://github.com/cran/Seurat | ||
| * URL: https://satijalab.org/seurat, https://github.com/satijalab/seurat | ||
| * BugReports: https://github.com/satijalab/seurat/issues | ||
| * Date/Publication: 2020-09-26 04:30:12 UTC | ||
| * Number of recursive dependencies: 230 | ||
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| Run `cloud_details(, "Seurat")` for more info | ||
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| </details> | ||
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| ## Error before installation | ||
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| ### Devel | ||
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| ``` | ||
| * using log directory ‘/tmp/workdir/Seurat/new/Seurat.Rcheck’ | ||
| * using R version 3.6.3 (2020-02-29) | ||
| * using platform: x86_64-pc-linux-gnu (64-bit) | ||
| * using session charset: UTF-8 | ||
| * using options ‘--no-manual --no-build-vignettes’ | ||
| * checking for file ‘Seurat/DESCRIPTION’ ... OK | ||
| * this is package ‘Seurat’ version ‘3.2.2’ | ||
| * package encoding: UTF-8 | ||
| * checking package namespace information ... OK | ||
| * checking package dependencies ... ERROR | ||
| Packages suggested but not available: | ||
| 'S4Vectors', 'SummarizedExperiment', 'SingleCellExperiment', 'MAST', | ||
| 'DESeq2', 'BiocGenerics', 'GenomicRanges', 'GenomeInfoDb', 'IRanges', | ||
| 'rtracklayer', 'monocle', 'Biobase', 'limma', 'metap' | ||
| The suggested packages are required for a complete check. | ||
| Checking can be attempted without them by setting the environment | ||
| variable _R_CHECK_FORCE_SUGGESTS_ to a false value. | ||
| See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’ | ||
| manual. | ||
| * DONE | ||
| Status: 1 ERROR | ||
| ``` | ||
| ### CRAN | ||
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| ``` | ||
| * using log directory ‘/tmp/workdir/Seurat/old/Seurat.Rcheck’ | ||
| * using R version 3.6.3 (2020-02-29) | ||
| * using platform: x86_64-pc-linux-gnu (64-bit) | ||
| * using session charset: UTF-8 | ||
| * using options ‘--no-manual --no-build-vignettes’ | ||
| * checking for file ‘Seurat/DESCRIPTION’ ... OK | ||
| * this is package ‘Seurat’ version ‘3.2.2’ | ||
| * package encoding: UTF-8 | ||
| * checking package namespace information ... OK | ||
| * checking package dependencies ... ERROR | ||
| Packages suggested but not available: | ||
| 'S4Vectors', 'SummarizedExperiment', 'SingleCellExperiment', 'MAST', | ||
| 'DESeq2', 'BiocGenerics', 'GenomicRanges', 'GenomeInfoDb', 'IRanges', | ||
| 'rtracklayer', 'monocle', 'Biobase', 'limma', 'metap' | ||
| The suggested packages are required for a complete check. | ||
| Checking can be attempted without them by setting the environment | ||
| variable _R_CHECK_FORCE_SUGGESTS_ to a false value. | ||
| See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’ | ||
| manual. | ||
| * DONE | ||
| Status: 1 ERROR | ||
| ``` | ||
| *Wow, no problems at all. :)* |