[TheiaEuk] revert busco container to busco:v5.3.2_cv1 for theiaeuk (#425

) * revert busco container to busco:v5.3.2_cv1 for theiaeuk * wdl makes me sad with name conflicts
theiagen · Apr 19, 2024 · 2f1b351 · 2f1b351
1 parent 87c5592
commit 2f1b351
Showing 1 changed file with 3 additions and 1 deletion.
diff --git a/workflows/theiaeuk/wf_theiaeuk_illumina_pe.wdl b/workflows/theiaeuk/wf_theiaeuk_illumina_pe.wdl
@@ -33,6 +33,7 @@ workflow theiaeuk_illumina_pe {
     Int trim_quality_min_score = 20
     Int trim_window_size = 10
     Int busco_memory = 24
+    String busco_docker_image = "us-docker.pkg.dev/general-theiagen/ezlabgva/busco:v5.3.2_cv1"
     Boolean skip_screen = false 
     File? qc_check_table
     String? expected_taxon
@@ -141,7 +142,8 @@ workflow theiaeuk_illumina_pe {
           assembly = shovill_pe.assembly_fasta,
           samplename = samplename,
           eukaryote = true,
-          memory = busco_memory
+          memory = busco_memory,
+          docker = busco_docker_image
       }
       if (defined(qc_check_table)) {
         call qc_check.qc_check_phb as qc_check_task {