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Creates a hybrid raster, boxplot and violin plot on the current matplotlib axis in python
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swilshin/hybridrasterbp
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Hybrid raster boxplot by Simon Wilshin. The function hybridRasterBp creates a hybrid raster, boxplot and violin plot on the current matplotlib axis, similar to those in these papers: https://www.nature.com/articles/nature25479 http://jeb.biologists.org/content/220/10/1864 A raster plot is a plot with each data point represented by a single marker, a boxplot performs aggregation and has a box with a line indicating some measure of central tendency. The edges of the box indicate a measure of spread. Whiskers are added to the box provide both a further indication of spread, and to indicate outliers which are plotted with their own markers. Outlier as already plotted in the raster plot so there are disabled here. A violin plot uses kernel density estimation to approximate the distribution of the data, a line indicates this approximate distribution. Typically a violin plot will have markers indicating some measure of central tendency and spread, but this is not done here since these are already present on the boxplot. This work was completed with support from the Royal Veterinary College, London (www.rvc.ac.uk). Feedback or bug reports can be sent to Simon Wilshin via [email protected] This program is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License for more details. You should have received a copy of the GNU General Public License along with this program. If not, see <http://www.gnu.org/licenses/>. Created by Simon Wilshin Date 2018/02/23
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Creates a hybrid raster, boxplot and violin plot on the current matplotlib axis in python
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