Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

Remove kraken-biom dep #14

Merged
merged 21 commits into from
Mar 29, 2024
Merged

Remove kraken-biom dep #14

merged 21 commits into from
Mar 29, 2024

Commits on Nov 9, 2023

  1. Add gitignore

    @Ulthran
    Ulthran committed Nov 9, 2023
    Configuration menu
    Copy the full SHA
    d2f1cd2 View commit details
    Browse the repository at this point in the history

  2. Fix test workflow

    @Ulthran
    Ulthran committed Nov 9, 2023
    Configuration menu
    Copy the full SHA
    f783174 View commit details
    Browse the repository at this point in the history

  3. Add conda_env_check

    @Ulthran
    Ulthran committed Nov 9, 2023
    Configuration menu
    Copy the full SHA
    e054c05 View commit details
    Browse the repository at this point in the history

  4. Fix empty test check

    @Ulthran
    Ulthran committed Nov 9, 2023
    Configuration menu
    Copy the full SHA
    384dd04 View commit details
    Browse the repository at this point in the history

  5. Don't use pin with pip in env

    @Ulthran
    Ulthran committed Nov 9, 2023
    Configuration menu
    Copy the full SHA
    fe98d07 View commit details
    Browse the repository at this point in the history

  6. Fix test path

    @Ulthran
    Ulthran committed Nov 9, 2023
    Configuration menu
    Copy the full SHA
    eafa840 View commit details
    Browse the repository at this point in the history

  7. Test sbx_test_action v1

    @Ulthran
    Ulthran committed Nov 9, 2023
    Configuration menu
    Copy the full SHA
    cd08820 View commit details
    Browse the repository at this point in the history

  8. Strip newline

    @Ulthran
    Ulthran committed Nov 9, 2023
    Configuration menu
    Copy the full SHA
    0f1375d View commit details
    Browse the repository at this point in the history

Commits on Feb 14, 2024

  1. Add summary script

    @Ulthran
    Ulthran committed Feb 14, 2024
    Configuration menu
    Copy the full SHA
    fd5652a View commit details
    Browse the repository at this point in the history

  2. Refactor CI/CD workflows

    @Ulthran
    Ulthran committed Feb 14, 2024
    Configuration menu
    Copy the full SHA
    ab767f3 View commit details
    Browse the repository at this point in the history

  3. Merge with main

    @Ulthran
    Ulthran committed Feb 14, 2024
    Configuration menu
    Copy the full SHA
    a90eb54 View commit details
    Browse the repository at this point in the history

  4. Little refactoring in e2e test

    @Ulthran
    Ulthran committed Feb 14, 2024
    Configuration menu
    Copy the full SHA
    b4502c6 View commit details
    Browse the repository at this point in the history

  5. Actually write output file

    @Ulthran
    Ulthran committed Feb 14, 2024
    Configuration menu
    Copy the full SHA
    4570ef4 View commit details
    Browse the repository at this point in the history

  6. Resolve abs paths

    @Ulthran
    Ulthran committed Feb 14, 2024
    Configuration menu
    Copy the full SHA
    296bbd0 View commit details
    Browse the repository at this point in the history

Commits on Feb 15, 2024

  1. Update empty input report line

    @Ulthran
    Ulthran committed Feb 15, 2024
    Configuration menu
    Copy the full SHA
    7cba513 View commit details
    Browse the repository at this point in the history

  2. Update test checks

    @Ulthran
    Ulthran committed Feb 15, 2024
    Configuration menu
    Copy the full SHA
    fb8f1aa View commit details
    Browse the repository at this point in the history

  3. Actually fix test values

    @Ulthran
    Ulthran committed Feb 15, 2024
    Configuration menu
    Copy the full SHA
    6d5ed60 View commit details
    Browse the repository at this point in the history

Commits on Feb 16, 2024

  1. Find bacteria line

    @Ulthran
    Ulthran committed Feb 16, 2024
    Configuration menu
    Copy the full SHA
    e98b4a7 View commit details
    Browse the repository at this point in the history

  2. DEBUG

    @Ulthran
    Ulthran committed Feb 16, 2024
    Configuration menu
    Copy the full SHA
    a22930f View commit details
    Browse the repository at this point in the history

Commits on Feb 23, 2024

  1. Functioning summary script and unit tests

    @Ulthran
    Ulthran committed Feb 23, 2024
    Configuration menu
    Copy the full SHA
    343a433 View commit details
    Browse the repository at this point in the history

  2. Improve unit testing

    @Ulthran
    Ulthran committed Feb 23, 2024
    Configuration menu
    Copy the full SHA
    f942fcd View commit details
    Browse the repository at this point in the history