Merge pull request #15 from sunbeam-labs/fix-env

Add pip and git to conda environment
sunbeam-labs · Dec 1, 2023 · 60f5af1 · 60f5af1
2 parents 9ec0b8a + 2134cd7
commit 60f5af1
Showing 1 changed file with 11 additions and 9 deletions.
diff --git a/sbx_kraken_env.yml b/sbx_kraken_env.yml
@@ -1,9 +1,11 @@
-name: sbx_kraken
-channels:
-  - bioconda
-dependencies:
-  - biom-format
-  - kraken2
-  - python>=3
-  - pip:
-    - git+http://github.com/smdabdoub/kraken-biom.git
+name: sbx_kraken
+channels:
+  - bioconda
+dependencies:
+  - biom-format
+  - kraken2
+  - python>=3
+  - pip
+  - git
+  - pip:
+    - git+http://github.com/smdabdoub/kraken-biom.git