Adds --min-ratio-behavior option to allow for skipping chunks with lo… #19
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| name: build and run tests | |
| on: | |
| push: | |
| branches: [ master ] | |
| pull_request: | |
| branches: [ master ] | |
| jobs: | |
| build: | |
| runs-on: ubuntu-20.04 | |
| steps: | |
| - uses: actions/checkout@v2 | |
| - name: build and test | |
| shell: bash | |
| run: | | |
| set -euo pipefail | |
| sudo apt update | |
| sudo apt install -y build-essential bcftools cmake git gzip python3-dev python3-pip python3-setuptools | |
| pip3 --version | |
| pip3 install wheel | |
| pip3 install cget | |
| cget ignore xz | |
| cget install -f ./requirements.txt | |
| cmake --version | |
| mkdir build && cd build | |
| cmake -DBUILD_TESTS=1 -DCMAKE_TOOLCHAIN_FILE=../cget/cget/cget.cmake -DCMAKE_BUILD_TYPE=Debug .. | |
| make | |
| make CTEST_OUTPUT_ON_FAILURE=1 test |