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taxid-changelog v2023.12

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@shenwei356 shenwei356 released this 06 Dec 09:56

I changed a computer and didn't conclude the older taxdump files before 2014-08-01.

$ zcat taxid-changelog.csv.gz \
    | csvtk grep -f taxid -p 562 \
    | csvtk cut -f -lineage-taxids \
    | csvtk pretty -W 38 -x ';'
taxid   version      change           change-value    name               rank      lineage                               
-----   ----------   --------------   -------------   ----------------   -------   --------------------------------------
562     2014-08-01   NEW                              Escherichia coli   species   cellular organisms;Bacteria;          
                                                                                   Proteobacteria;Gammaproteobacteria;   
                                                                                   Enterobacteriales;Enterobacteriaceae; 
                                                                                   Escherichia;Escherichia coli          
562     2014-08-01   ABSORB           662101;662104   Escherichia coli   species   cellular organisms;Bacteria;          
                                                                                   Proteobacteria;Gammaproteobacteria;   
                                                                                   Enterobacteriales;Enterobacteriaceae; 
                                                                                   Escherichia;Escherichia coli          
562     2015-11-01   ABSORB           1637691         Escherichia coli   species   cellular organisms;Bacteria;          
                                                                                   Proteobacteria;Gammaproteobacteria;   
                                                                                   Enterobacteriales;Enterobacteriaceae; 
                                                                                   Escherichia;Escherichia coli          
562     2016-10-01   CHANGE_LIN_LIN                   Escherichia coli   species   cellular organisms;Bacteria;          
                                                                                   Proteobacteria;Gammaproteobacteria;   
                                                                                   Enterobacterales;Enterobacteriaceae;  
                                                                                   Escherichia;Escherichia coli          
562     2018-06-01   ABSORB           469598          Escherichia coli   species   cellular organisms;Bacteria;          
                                                                                   Proteobacteria;Gammaproteobacteria;   
                                                                                   Enterobacterales;Enterobacteriaceae;  
                                                                                   Escherichia;Escherichia coli          
562     2021-11-01   ABSORB           1806490         Escherichia coli   species   cellular organisms;Bacteria;          
                                                                                   Proteobacteria;Gammaproteobacteria;   
                                                                                   Enterobacterales;Enterobacteriaceae;  
                                                                                   Escherichia;Escherichia coli          
562     2023-02-01   CHANGE_LIN_LIN                   Escherichia coli   species   cellular organisms;Bacteria;          
                                                                                   Pseudomonadota;Gammaproteobacteria;   
                                                                                   Enterobacterales;Enterobacteriaceae;  
                                                                                   Escherichia;Escherichia coli