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Bareword found where operator expected at PreprocessSAMs.pl #48

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mictadlo opened this issue Aug 6, 2018 · 1 comment
Open

Bareword found where operator expected at PreprocessSAMs.pl #48

mictadlo opened this issue Aug 6, 2018 · 1 comment

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@mictadlo
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mictadlo commented Aug 6, 2018

Hi,
I got the following errors:

Bareword found where operator expected at /work/waterhouse_team/apps/lachesis/bin/PreprocessSAMs.pl line 6, near "// This"
        (Missing operator before This?)
Number found where operator expected at /work/waterhouse_team/apps/lachesis/bin/PreprocessSAMs.pl line 6, near ") 2014"
        (Missing operator before 2014?)
Bareword found where operator expected at /work/waterhouse_team/apps/lachesis/bin/PreprocessSAMs.pl line 6, near "2015 by"
        (Missing operator before by?)
syntax error at /work/waterhouse_team/apps/lachesis/bin/PreprocessSAMs.pl line 6, near "// This software "
Unknown regexp modifier "/B" at /work/waterhouse_team/apps/lachesis/bin/PreprocessSAMs.pl line 24, at end of line
  (Might be a runaway multi-line // string starting on line 17)
Unknown regexp modifier "/A" at /work/waterhouse_team/apps/lachesis/bin/PreprocessSAMs.pl line 24, at end of line
Unknown regexp modifier "/M" at /work/waterhouse_team/apps/lachesis/bin/PreprocessSAMs.pl line 24, at end of line
"use" not allowed in expression at /work/waterhouse_team/apps/lachesis/bin/PreprocessSAMs.pl line 24, at end of line
Execution of /work/waterhouse_team/apps/lachesis/bin/PreprocessSAMs.pl aborted due to compilation errors.

What did I miss?

Thank you in advance,

Michal

@mictadlo
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mictadlo commented Aug 6, 2018

all // comments have to be removed

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