Skip to content

[FIX] ciso646 is deprecated #2675

[FIX] ciso646 is deprecated

[FIX] ciso646 is deprecated #2675

Workflow file for this run

# SPDX-FileCopyrightText: 2006-2024 Knut Reinert & Freie Universität Berlin
# SPDX-FileCopyrightText: 2016-2024 Knut Reinert & MPI für molekulare Genetik
# SPDX-License-Identifier: CC0-1.0
name: Linux
on:
push:
branches:
- 'main'
pull_request:
types:
- unlabeled
workflow_dispatch:
concurrency:
group: misc-${{ github.event.pull_request.number || github.ref }}
cancel-in-progress: ${{ github.event_name != 'push' }}
env:
SEQAN3_NO_VERSION_CHECK: 1
TZ: Europe/Berlin
defaults:
run:
shell: bash -Eeuxo pipefail {0}
jobs:
build:
name: ${{ matrix.build }} ${{ matrix.compiler }}
runs-on: ubuntu-latest
if: github.repository_owner == 'seqan' || github.event_name == 'workflow_dispatch' || github.event.label.name == 'lint'
strategy:
fail-fast: false
matrix:
compiler: ["clang-19", "gcc-14", "gcc-11", "intel"]
build: ["snippet", "performance", "header"]
include:
- compiler: "intel"
cxx_flags: "-fp-model=strict -Wno-overriding-option"
container:
image: ghcr.io/seqan/${{ matrix.compiler }}
volumes:
- /home/runner:/home/runner
steps:
- name: Checkout
uses: actions/checkout@v4
- name: Load ccache
uses: actions/cache@v4
with:
path: /home/runner/.ccache
key: ccache-${{ runner.os }}-${{ github.workflow }}-${{ matrix.build }}-${{ matrix.compiler }}-${{ github.ref }}-${{ github.run_id }}
restore-keys: |
ccache-${{ runner.os }}-${{ github.workflow }}-${{ matrix.build }}-${{ matrix.compiler }}-${{ github.ref }}
ccache-${{ runner.os }}-${{ github.workflow }}-${{ matrix.build }}-${{ matrix.compiler }}
- name: Configure tests
run: |
mkdir build && cd build
cmake ../test/${{ matrix.build }} -DCMAKE_BUILD_TYPE=Release \
-DCMAKE_CXX_FLAGS="${{ matrix.cxx_flags }}" \
-DSEQAN3_BENCHMARK_MIN_TIME=0.01
case "${{ matrix.build }}" in
snippet) make gtest_main;;
performance) make benchmark_main;;
header) make gtest_main benchmark_main;;
esac
- name: Build tests
working-directory: build
run: |
ccache -z
make -k
ccache -svvx
- name: Run tests
working-directory: build
run: ctest . -j${{ matrix.build == 'snippet' && '1' || '' }} --output-on-failure --no-tests=error