Install kernel in workflow

scverse · Jul 11, 2023 · e235bd7 · e235bd7
1 parent 522f2e1
commit e235bd7
Showing 1 changed file with 6 additions and 2 deletions.
diff --git a/.github/workflows/run-linux-cuda.yml b/.github/workflows/run-linux-cuda.yml
@@ -22,11 +22,15 @@ jobs:
 
       - name: Install dependencies
         run: |
-          pip install -U scvi-tools[tutorials]
+          python -m pip install -U scvi-tools[tutorials]
 
       - name: Install nbconvert
         run: |
-          pip install -U nbconvert
+          python -m pip install -U jupyter ipykernel nbconvert
+
+      - name: Install kernel
+        run: |
+          python -m ipykernel install
 
       - name: Run notebook
         run: |