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add local db support for snpeff, update config names and restructure .smk rule files #100

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merged 13 commits into from
Jun 27, 2024

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sanjaynagi
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@sanjaynagi sanjaynagi commented Jun 18, 2024

Previously could only use downloaded databases. Involves a change to the config.yaml. Will close #98

Have also updated the config names as in #87

@sanjaynagi sanjaynagi changed the title add local db support for snpeff add local db support for snpeff and update config names Jun 18, 2024
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also addresses #97

@sanjaynagi sanjaynagi merged commit 69fe338 into master Jun 27, 2024
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@sanjaynagi sanjaynagi changed the title add local db support for snpeff and update config names add local db support for snpeff, update config names and restructure .smk rule files Jun 27, 2024
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allow local snpeff db
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