Deployed 6bb1a4c with MkDocs version: 1.6.0

404.html

@@ -14,7 +14,7 @@
 
 
       <link rel="icon" href="/rcsb/py-mmcif/static/images/favicon.ico">
-      <meta name="generator" content="mkdocs-1.6.0, mkdocs-material-9.5.27">
+      <meta name="generator" content="mkdocs-1.6.0, mkdocs-material-9.5.28">
 
 
 
@@ -904,7 +904,7 @@ <h1>404 - Not found</h1>
     <script id="__config" type="application/json">{"base": "/rcsb/py-mmcif/", "features": ["navigation.tabs", "navigation.expand"], "search": "/rcsb/py-mmcif/assets/javascripts/workers/search.b8dbb3d2.min.js", "translations": {"clipboard.copied": "Copied to clipboard", "clipboard.copy": "Copy to clipboard", "search.result.more.one": "1 more on this page", "search.result.more.other": "# more on this page", "search.result.none": "No matching documents", "search.result.one": "1 matching document", "search.result.other": "# matching documents", "search.result.placeholder": "Type to start searching", "search.result.term.missing": "Missing", "select.version": "Select version"}}</script>
 
 
-      <script src="/rcsb/py-mmcif/assets/javascripts/bundle.ad660dcc.min.js"></script>
+      <script src="/rcsb/py-mmcif/assets/javascripts/bundle.fe8b6f2b.min.js"></script>
 
 
   </body>

api_reference/BinaryCifReader/index.html

@@ -20,7 +20,7 @@
 
 
       <link rel="icon" href="../../static/images/favicon.ico">
-      <meta name="generator" content="mkdocs-1.6.0, mkdocs-material-9.5.27">
+      <meta name="generator" content="mkdocs-1.6.0, mkdocs-material-9.5.28">
 
 
 
@@ -2667,7 +2667,7 @@ <h2 id="mmcif.io.BinaryCifReader.BinaryCifDecoders.stringArrayDecoder" class="do
     <script id="__config" type="application/json">{"base": "../..", "features": ["navigation.tabs", "navigation.expand"], "search": "../../assets/javascripts/workers/search.b8dbb3d2.min.js", "translations": {"clipboard.copied": "Copied to clipboard", "clipboard.copy": "Copy to clipboard", "search.result.more.one": "1 more on this page", "search.result.more.other": "# more on this page", "search.result.none": "No matching documents", "search.result.one": "1 matching document", "search.result.other": "# matching documents", "search.result.placeholder": "Type to start searching", "search.result.term.missing": "Missing", "select.version": "Select version"}}</script>
 
 
-      <script src="../../assets/javascripts/bundle.ad660dcc.min.js"></script>
+      <script src="../../assets/javascripts/bundle.fe8b6f2b.min.js"></script>
 
 
   </body>

api_reference/BinaryCifWriter/index.html

@@ -20,7 +20,7 @@
 
 
       <link rel="icon" href="../../static/images/favicon.ico">
-      <meta name="generator" content="mkdocs-1.6.0, mkdocs-material-9.5.27">
+      <meta name="generator" content="mkdocs-1.6.0, mkdocs-material-9.5.28">
 
 
 
@@ -1758,6 +1758,7 @@ <h2 id="mmcif.io.BinaryCifWriter.BinaryCifWriter.serialize" class="doc doc-headi
             <span class="n">colDataList</span> <span class="o">=</span> <span class="n">TypedArray</span><span class="p">(</span><span class="n">colDataList</span><span class="p">)</span>
             <span class="n">legacy</span> <span class="o">=</span> <span class="kc">True</span>
 
+        <span class="n">encDict</span> <span class="o">=</span> <span class="kc">None</span>
         <span class="k">for</span> <span class="n">encType</span> <span class="ow">in</span> <span class="n">encodingTypeList</span><span class="p">:</span>
             <span class="k">if</span> <span class="n">encType</span> <span class="o">==</span> <span class="s2">&quot;ByteArray&quot;</span><span class="p">:</span>
                 <span class="n">colDataList</span><span class="p">,</span> <span class="n">encDict</span> <span class="o">=</span> <span class="bp">self</span><span class="o">.</span><span class="n">byteArrayEncoderTyped</span><span class="p">(</span><span class="n">colDataList</span><span class="p">,</span> <span class="n">dataType</span><span class="p">)</span>
@@ -2173,6 +2174,7 @@ <h2 id="mmcif.io.BinaryCifWriter.BinaryCifWriter.serialize" class="doc doc-headi
 
             <span class="n">encodedColDataList</span><span class="o">.</span><span class="n">append</span><span class="p">(</span><span class="n">colVal</span><span class="p">)</span>
 
+        <span class="n">byteArrayType</span> <span class="o">=</span> <span class="kc">None</span>  <span class="c1"># Should never happen, but keep pylint happy. 4 bytes handled above</span>
         <span class="k">if</span> <span class="n">nbytes</span> <span class="o">==</span> <span class="mi">1</span><span class="p">:</span>
             <span class="n">byteArrayType</span> <span class="o">=</span> <span class="s2">&quot;integer_8&quot;</span> <span class="k">if</span> <span class="n">isSigned</span> <span class="k">else</span> <span class="s2">&quot;unsigned_integer_8&quot;</span>
         <span class="k">elif</span> <span class="n">nbytes</span> <span class="o">==</span> <span class="mi">2</span><span class="p">:</span>
@@ -2673,6 +2675,7 @@ <h2 id="mmcif.io.BinaryCifWriter.BinaryCifEncoders.encode" class="doc doc-headin
         <span class="n">colDataList</span> <span class="o">=</span> <span class="n">TypedArray</span><span class="p">(</span><span class="n">colDataList</span><span class="p">)</span>
         <span class="n">legacy</span> <span class="o">=</span> <span class="kc">True</span>
 
+    <span class="n">encDict</span> <span class="o">=</span> <span class="kc">None</span>
     <span class="k">for</span> <span class="n">encType</span> <span class="ow">in</span> <span class="n">encodingTypeList</span><span class="p">:</span>
         <span class="k">if</span> <span class="n">encType</span> <span class="o">==</span> <span class="s2">&quot;ByteArray&quot;</span><span class="p">:</span>
             <span class="n">colDataList</span><span class="p">,</span> <span class="n">encDict</span> <span class="o">=</span> <span class="bp">self</span><span class="o">.</span><span class="n">byteArrayEncoderTyped</span><span class="p">(</span><span class="n">colDataList</span><span class="p">,</span> <span class="n">dataType</span><span class="p">)</span>
@@ -3195,6 +3198,7 @@ <h2 id="mmcif.io.BinaryCifWriter.BinaryCifEncoders.integerPackingEncoderTyped" c
 
         <span class="n">encodedColDataList</span><span class="o">.</span><span class="n">append</span><span class="p">(</span><span class="n">colVal</span><span class="p">)</span>
 
+    <span class="n">byteArrayType</span> <span class="o">=</span> <span class="kc">None</span>  <span class="c1"># Should never happen, but keep pylint happy. 4 bytes handled above</span>
     <span class="k">if</span> <span class="n">nbytes</span> <span class="o">==</span> <span class="mi">1</span><span class="p">:</span>
         <span class="n">byteArrayType</span> <span class="o">=</span> <span class="s2">&quot;integer_8&quot;</span> <span class="k">if</span> <span class="n">isSigned</span> <span class="k">else</span> <span class="s2">&quot;unsigned_integer_8&quot;</span>
     <span class="k">elif</span> <span class="n">nbytes</span> <span class="o">==</span> <span class="mi">2</span><span class="p">:</span>
@@ -3549,7 +3553,7 @@ <h2 id="mmcif.io.BinaryCifWriter.BinaryCifEncoders.stringArrayMaskedEncoder" cla
     <script id="__config" type="application/json">{"base": "../..", "features": ["navigation.tabs", "navigation.expand"], "search": "../../assets/javascripts/workers/search.b8dbb3d2.min.js", "translations": {"clipboard.copied": "Copied to clipboard", "clipboard.copy": "Copy to clipboard", "search.result.more.one": "1 more on this page", "search.result.more.other": "# more on this page", "search.result.none": "No matching documents", "search.result.one": "1 matching document", "search.result.other": "# matching documents", "search.result.placeholder": "Type to start searching", "search.result.term.missing": "Missing", "select.version": "Select version"}}</script>
 
 
-      <script src="../../assets/javascripts/bundle.ad660dcc.min.js"></script>
+      <script src="../../assets/javascripts/bundle.fe8b6f2b.min.js"></script>
 
 
   </body>

api_reference/CifFile/index.html

@@ -20,7 +20,7 @@
 
 
       <link rel="icon" href="../../static/images/favicon.ico">
-      <meta name="generator" content="mkdocs-1.6.0, mkdocs-material-9.5.27">
+      <meta name="generator" content="mkdocs-1.6.0, mkdocs-material-9.5.28">
 
 
 
@@ -1080,7 +1080,7 @@ <h1>CifFile</h1>
     <script id="__config" type="application/json">{"base": "../..", "features": ["navigation.tabs", "navigation.expand"], "search": "../../assets/javascripts/workers/search.b8dbb3d2.min.js", "translations": {"clipboard.copied": "Copied to clipboard", "clipboard.copy": "Copy to clipboard", "search.result.more.one": "1 more on this page", "search.result.more.other": "# more on this page", "search.result.none": "No matching documents", "search.result.one": "1 matching document", "search.result.other": "# matching documents", "search.result.placeholder": "Type to start searching", "search.result.term.missing": "Missing", "select.version": "Select version"}}</script>
 
 
-      <script src="../../assets/javascripts/bundle.ad660dcc.min.js"></script>
+      <script src="../../assets/javascripts/bundle.fe8b6f2b.min.js"></script>
 
 
   </body>

api_reference/DataCategory/index.html

@@ -20,7 +20,7 @@
 
 
       <link rel="icon" href="../../static/images/favicon.ico">
-      <meta name="generator" content="mkdocs-1.6.0, mkdocs-material-9.5.27">
+      <meta name="generator" content="mkdocs-1.6.0, mkdocs-material-9.5.28">
 
 
 
@@ -2506,7 +2506,7 @@ <h2 id="mmcif.api.DataCategory.DataCategory.setValue" class="doc doc-heading">
     <script id="__config" type="application/json">{"base": "../..", "features": ["navigation.tabs", "navigation.expand"], "search": "../../assets/javascripts/workers/search.b8dbb3d2.min.js", "translations": {"clipboard.copied": "Copied to clipboard", "clipboard.copy": "Copy to clipboard", "search.result.more.one": "1 more on this page", "search.result.more.other": "# more on this page", "search.result.none": "No matching documents", "search.result.one": "1 matching document", "search.result.other": "# matching documents", "search.result.placeholder": "Type to start searching", "search.result.term.missing": "Missing", "select.version": "Select version"}}</script>
 
 
-      <script src="../../assets/javascripts/bundle.ad660dcc.min.js"></script>
+      <script src="../../assets/javascripts/bundle.fe8b6f2b.min.js"></script>
 
 
   </body>

api_reference/DataCategoryBase/index.html

@@ -20,7 +20,7 @@
 
 
       <link rel="icon" href="../../static/images/favicon.ico">
-      <meta name="generator" content="mkdocs-1.6.0, mkdocs-material-9.5.27">
+      <meta name="generator" content="mkdocs-1.6.0, mkdocs-material-9.5.28">
 
 
 
@@ -2321,7 +2321,7 @@ <h2 id="mmcif.api.DataCategoryBase.DataCategoryBase.setMapping" class="doc doc-h
     <script id="__config" type="application/json">{"base": "../..", "features": ["navigation.tabs", "navigation.expand"], "search": "../../assets/javascripts/workers/search.b8dbb3d2.min.js", "translations": {"clipboard.copied": "Copied to clipboard", "clipboard.copy": "Copy to clipboard", "search.result.more.one": "1 more on this page", "search.result.more.other": "# more on this page", "search.result.none": "No matching documents", "search.result.one": "1 matching document", "search.result.other": "# matching documents", "search.result.placeholder": "Type to start searching", "search.result.term.missing": "Missing", "select.version": "Select version"}}</script>
 
 
-      <script src="../../assets/javascripts/bundle.ad660dcc.min.js"></script>
+      <script src="../../assets/javascripts/bundle.fe8b6f2b.min.js"></script>
 
 
   </body>

api_reference/DataCategoryFormatted/index.html

@@ -20,7 +20,7 @@
 
 
       <link rel="icon" href="../../static/images/favicon.ico">
-      <meta name="generator" content="mkdocs-1.6.0, mkdocs-material-9.5.27">
+      <meta name="generator" content="mkdocs-1.6.0, mkdocs-material-9.5.28">
 
 
 
@@ -1059,7 +1059,7 @@ <h1>DataCategoryFormatted</h1>
                     <span class="k">return</span> <span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">__doubleQuotedList</span><span class="p">(</span><span class="n">inp</span><span class="p">),</span> <span class="s2">&quot;DT_ITEM_NAME&quot;</span><span class="p">)</span>
                 <span class="k">elif</span> <span class="n">inp</span><span class="p">[</span><span class="mi">0</span><span class="p">]</span> <span class="ow">in</span> <span class="p">[</span><span class="s2">&quot;[&quot;</span><span class="p">,</span> <span class="s2">&quot;]&quot;</span><span class="p">,</span> <span class="s2">&quot;$&quot;</span><span class="p">,</span> <span class="s2">&quot;#&quot;</span><span class="p">,</span> <span class="s2">&quot;;&quot;</span><span class="p">]:</span>
                     <span class="k">return</span> <span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">__doubleQuotedList</span><span class="p">(</span><span class="n">inp</span><span class="p">),</span> <span class="s2">&quot;DT_DOUBLE_QUOTED_STRING&quot;</span><span class="p">)</span>
-                <span class="k">elif</span> <span class="n">inp</span><span class="p">[:</span><span class="mi">5</span><span class="p">]</span><span class="o">.</span><span class="n">lower</span><span class="p">()</span> <span class="ow">in</span> <span class="p">[</span><span class="s2">&quot;data_&quot;</span><span class="p">,</span> <span class="s2">&quot;loop_&quot;</span><span class="p">,</span> <span class="s2">&quot;save_&quot;</span><span class="p">,</span> <span class="s2">&quot;stop_&quot;</span><span class="p">]:</span>
+                <span class="k">elif</span> <span class="n">inp</span><span class="p">[:</span><span class="mi">5</span><span class="p">]</span><span class="o">.</span><span class="n">lower</span><span class="p">()</span> <span class="ow">in</span> <span class="p">[</span><span class="s2">&quot;data_&quot;</span><span class="p">,</span> <span class="s2">&quot;loop_&quot;</span><span class="p">,</span> <span class="s2">&quot;save_&quot;</span><span class="p">,</span> <span class="s2">&quot;stop_&quot;</span><span class="p">]</span> <span class="ow">or</span> <span class="n">inp</span><span class="p">[:</span><span class="mi">7</span><span class="p">]</span><span class="o">.</span><span class="n">lower</span><span class="p">()</span> <span class="ow">in</span> <span class="p">[</span><span class="s2">&quot;global_&quot;</span><span class="p">]:</span>
                     <span class="k">return</span> <span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">__doubleQuotedList</span><span class="p">(</span><span class="n">inp</span><span class="p">),</span> <span class="s2">&quot;DT_DOUBLE_QUOTED_STRING&quot;</span><span class="p">)</span>
                 <span class="k">else</span><span class="p">:</span>
                     <span class="k">return</span> <span class="p">([</span><span class="nb">str</span><span class="p">(</span><span class="n">inp</span><span class="p">)],</span> <span class="s2">&quot;DT_UNQUOTED_STRING&quot;</span><span class="p">)</span>
@@ -1335,7 +1335,7 @@ <h1>DataCategoryFormatted</h1>
     <script id="__config" type="application/json">{"base": "../..", "features": ["navigation.tabs", "navigation.expand"], "search": "../../assets/javascripts/workers/search.b8dbb3d2.min.js", "translations": {"clipboard.copied": "Copied to clipboard", "clipboard.copy": "Copy to clipboard", "search.result.more.one": "1 more on this page", "search.result.more.other": "# more on this page", "search.result.none": "No matching documents", "search.result.one": "1 matching document", "search.result.other": "# matching documents", "search.result.placeholder": "Type to start searching", "search.result.term.missing": "Missing", "select.version": "Select version"}}</script>
 
 
-      <script src="../../assets/javascripts/bundle.ad660dcc.min.js"></script>
+      <script src="../../assets/javascripts/bundle.fe8b6f2b.min.js"></script>
 
 
   </body>

api_reference/DataCategoryTyped/index.html

@@ -20,7 +20,7 @@
 
 
       <link rel="icon" href="../../static/images/favicon.ico">
-      <meta name="generator" content="mkdocs-1.6.0, mkdocs-material-9.5.27">
+      <meta name="generator" content="mkdocs-1.6.0, mkdocs-material-9.5.28">
 
 
 
@@ -1897,7 +1897,7 @@ <h2 id="mmcif.api.DataCategoryTyped.DataCategoryTyped.getAttributeInfo" class="d
     <script id="__config" type="application/json">{"base": "../..", "features": ["navigation.tabs", "navigation.expand"], "search": "../../assets/javascripts/workers/search.b8dbb3d2.min.js", "translations": {"clipboard.copied": "Copied to clipboard", "clipboard.copy": "Copy to clipboard", "search.result.more.one": "1 more on this page", "search.result.more.other": "# more on this page", "search.result.none": "No matching documents", "search.result.one": "1 matching document", "search.result.other": "# matching documents", "search.result.placeholder": "Type to start searching", "search.result.term.missing": "Missing", "select.version": "Select version"}}</script>
 
 
-      <script src="../../assets/javascripts/bundle.ad660dcc.min.js"></script>
+      <script src="../../assets/javascripts/bundle.fe8b6f2b.min.js"></script>
 
 
   </body>

api_reference/DictMethodRunner/index.html

@@ -20,7 +20,7 @@
 
 
       <link rel="icon" href="../../static/images/favicon.ico">
-      <meta name="generator" content="mkdocs-1.6.0, mkdocs-material-9.5.27">
+      <meta name="generator" content="mkdocs-1.6.0, mkdocs-material-9.5.28">
 
 
 
@@ -1399,7 +1399,7 @@ <h2 id="mmcif.api.DictMethodRunner.DictMethodRunner.apply" class="doc doc-headin
     <script id="__config" type="application/json">{"base": "../..", "features": ["navigation.tabs", "navigation.expand"], "search": "../../assets/javascripts/workers/search.b8dbb3d2.min.js", "translations": {"clipboard.copied": "Copied to clipboard", "clipboard.copy": "Copy to clipboard", "search.result.more.one": "1 more on this page", "search.result.more.other": "# more on this page", "search.result.none": "No matching documents", "search.result.one": "1 matching document", "search.result.other": "# matching documents", "search.result.placeholder": "Type to start searching", "search.result.term.missing": "Missing", "select.version": "Select version"}}</script>
 
 
-      <script src="../../assets/javascripts/bundle.ad660dcc.min.js"></script>
+      <script src="../../assets/javascripts/bundle.fe8b6f2b.min.js"></script>
 
 
   </body>

api_reference/DictionaryApi/index.html

@@ -20,7 +20,7 @@
 
 
       <link rel="icon" href="../../static/images/favicon.ico">
-      <meta name="generator" content="mkdocs-1.6.0, mkdocs-material-9.5.27">
+      <meta name="generator" content="mkdocs-1.6.0, mkdocs-material-9.5.28">
 
 
 
@@ -4001,7 +4001,7 @@ <h2 id="mmcif.api.DictionaryApi.DictionaryApi.getUnitsList" class="doc doc-headi
     <script id="__config" type="application/json">{"base": "../..", "features": ["navigation.tabs", "navigation.expand"], "search": "../../assets/javascripts/workers/search.b8dbb3d2.min.js", "translations": {"clipboard.copied": "Copied to clipboard", "clipboard.copy": "Copy to clipboard", "search.result.more.one": "1 more on this page", "search.result.more.other": "# more on this page", "search.result.none": "No matching documents", "search.result.one": "1 matching document", "search.result.other": "# matching documents", "search.result.placeholder": "Type to start searching", "search.result.term.missing": "Missing", "select.version": "Select version"}}</script>
 
 
-      <script src="../../assets/javascripts/bundle.ad660dcc.min.js"></script>
+      <script src="../../assets/javascripts/bundle.fe8b6f2b.min.js"></script>
 
 
   </body>