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Re-check with fixes
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hadley committed Dec 4, 2023
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7 changes: 7 additions & 0 deletions cran-comments.md
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## R CMD check results

0 errors | 0 warnings | 0 note

## revdepcheck results

We checked 570 reverse dependencies (526 from CRAN + 44 from Bioconductor), comparing R CMD check results across CRAN and dev versions of this package.

* We saw 0 new problems
* We failed to check 0 packages
56 changes: 0 additions & 56 deletions revdep/README.md
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# Revdeps

## Failed to check (44)

|package |version |error |warning |note |
|:------------------------------|:-------|:-----|:-------|:----|
|BiocPkgTools |? | | | |
|biodb |? | | | |
|biomaRt |? | | | |
|cola |? | | | |
|CompoundDb |? | | | |
|ELMER |? | | | |
|EpiTxDb |? | | | |
|ExpressionAtlas |? | | | |
|GenomicDataCommons |? | | | |
|GEOexplorer |? | | | |
|GEOfastq |? | | | |
|GEOquery |? | | | |
|Gviz |? | | | |
|healthyControlsPresenceChecker |? | | | |
|HPAanalyze |? | | | |
|immunotation |? | | | |
|InterMineR |? | | | |
|levi |? | | | |
|Macarron |? | | | |
|MACSQuantifyR |? | | | |
|MBQN |? | | | |
|memes |? | | | |
|mosbi |? | | | |
|ncRNAtools |? | | | |
|OmnipathR |? | | | |
|ORFik |? | | | |
|PhyloProfile |? | | | |
|RBioFormats |? | | | |
|rfaRm |? | | | |
|RGMQL |? | | | |
|rpx |? | | | |
|RTCGA |? | | | |
|SBGNview |? | | | |
|scPipe |? | | | |
|scRNAseqApp |? | | | |
|simona |? | | | |
|spatialHeatmap |? | | | |
|surfaltr |? | | | |
|syntenet |? | | | |
|TCGAbiolinks |? | | | |
|TCGAutils |? | | | |
|topdownr |? | | | |
|treeio |? | | | |
|tRNAdbImport |? | | | |

## New problems (2)

|package |version |error |warning |note |
|:----------|:-------|:------|:-------|:----|
|[fhircrackr](problems.md#fhircrackr)|2.1.1 |__+2__ | | |
|[pmparser](problems.md#pmparser)|1.0.17 |__+2__ | | |

17 changes: 2 additions & 15 deletions revdep/cran.md
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## revdepcheck results

We checked 570 reverse dependencies (526 from CRAN + 44 from Bioconductor), comparing R CMD check results across CRAN and dev versions of this package.
We checked 2 reverse dependencies, comparing R CMD check results across CRAN and dev versions of this package.

* We saw 2 new problems
* We saw 0 new problems
* We failed to check 0 packages

Issues with CRAN packages are summarised below.

### New problems
(This reports the first line of each new failure)

* fhircrackr
checking examples ... ERROR
checking re-building of vignette outputs ... ERROR

* pmparser
checking examples ... ERROR
checking tests ... ERROR

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