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    61 repositories

    • sequencescape

      Public
      Web based LIMS
      railssciencebiologylimsruby
      Ruby
      •
      MIT License
      •33•87•54•29•Updated Oct 22, 2024Oct 22, 2024

    • traction-service

      Public
      Ruby on Rails exposing a RESTful API for a Long Read LIMS
      Ruby
      •
      MIT License
      •5•4•16•0•Updated Oct 22, 2024Oct 22, 2024

    • traction-ui

      Public
      JavaScript
      •
      MIT License
      •5•2•28•3•Updated Oct 22, 2024Oct 22, 2024

    • labwhere

      Public
      A tool for tracking uniquely barcoded labware
      Ruby
      •
      MIT License
      •10•3•8•0•Updated Oct 22, 2024Oct 22, 2024

    • limber

      Public
      A config-driven LIMS built on Sequencescape, primarily for running library preparation pipelines in the laboratory
      railsvuelimssequencescape-client-application
      Ruby
      •
      MIT License
      •8•4•66•25•Updated Oct 22, 2024Oct 22, 2024

    • tol-lab-share

      Public
      Rabbitmq consumer for TOL data input
      Python
      •
      MIT License
      •0•0•0•3•Updated Oct 22, 2024Oct 22, 2024

    • sample-tracking

      Public
      Sample Tracking Report
      Python
      •0•0•11•0•Updated Oct 21, 2024Oct 21, 2024

    • crawler

      Public
      Store sample data from Lighthouse labs
      Python
      •
      MIT License
      •3•4•24•9•Updated Oct 21, 2024Oct 21, 2024

    • lab-share-lib

      Public
      Python library to interact with lab-share framework
      Python
      •
      MIT License
      •0•0•0•3•Updated Oct 21, 2024Oct 21, 2024

    • wrangler

      Public
      A microservice to deal with tube racks
      Python
      •
      MIT License
      •2•0•2•6•Updated Oct 21, 2024Oct 21, 2024

    • stan-client

      Public
      Front-end code for the Spatial Genomics LIMS
      TypeScript
      •
      MIT License
      •0•1•20•3•Updated Oct 18, 2024Oct 18, 2024

    • storelight

      Public
      New cgap storage application
      Java
      •0•0•0•0•Updated Oct 18, 2024Oct 18, 2024

    • stan-core

      Public
      Java
      •
      MIT License
      •2•0•6•1•Updated Oct 18, 2024Oct 18, 2024

    • asset_audits

      Public
      Add audits to assets in sequencescape
      railsruby
      Ruby
      •
      MIT License
      •7•3•5•4•Updated Oct 18, 2024Oct 18, 2024

    • gatekeeper

      Public
      Gatekeeper is used to track the production and validation of batches of tag plates for sequencing. It is designed to interface with the Sequencescape LIMS.
      railsruby
      Ruby
      •
      MIT License
      •5•0•3•10•Updated Oct 18, 2024Oct 18, 2024

    • samples_extraction

      Public
      Ruby
      •
      MIT License
      •7•0•16•15•Updated Oct 18, 2024Oct 18, 2024

    • quanthub

      Public
      Provides parsing and visualisation of the concentration information from qPCR and plate readers
      JavaScript
      •
      MIT License
      •4•2•0•11•Updated Oct 18, 2024Oct 18, 2024

    • mixtio

      Public
      Ruby
      •
      GNU General Public License v3.0
      •7•2•0•15•Updated Oct 18, 2024Oct 18, 2024

    • General-Backlog-Items

      Public
      Broad bucket to collate backlog items that have no obvious repository
      0•0•49•0•Updated Oct 17, 2024Oct 17, 2024

    • lighthouse

      Public
      API to search through data provided by Lighthouse Labs
      Python
      •
      MIT License
      •1•2•17•11•Updated Oct 16, 2024Oct 16, 2024

    • sm_workflow_lims

      Public
      A small LIMS to assist with managing workflows
      railsruby
      Ruby
      •
      MIT License
      •6•1•8•15•Updated Oct 16, 2024Oct 16, 2024

    • unified_warehouse

      Public
      ruby
      Ruby
      •
      MIT License
      •9•2•1•0•Updated Oct 9, 2024Oct 9, 2024

    • interrogator

      Public
      A custom interface to query Intergration Suite results via GitLab
      rubysinatra
      Ruby
      •
      MIT License
      •0•0•0•1•Updated Oct 7, 2024Oct 7, 2024

    • print_my_barcode

      Public
      Barcode printing service
      Ruby
      •5•2•2•3•Updated Oct 4, 2024Oct 4, 2024

    • event_warehouse

      Public
      A simple message queue driven event store
      rubyrails
      Ruby
      •
      MIT License
      •4•0•6•3•Updated Oct 2, 2024Oct 2, 2024

    • sprint

      Public
      Simple print service
      CSS
      •
      MIT License
      •0•0•0•3•Updated Sep 27, 2024Sep 27, 2024

    • janitor

      Public
      A Python application which hosts task scripts for data management and clean up tasks, running them on a schedule.
      Python
      •
      MIT License
      •0•0•0•8•Updated Sep 27, 2024Sep 27, 2024

    • issuer

      Public
      A GitHub action that automatically generates issue numbers for user stories
      Python
      •0•0•5•0•Updated Sep 12, 2024Sep 12, 2024

    • .github

      Public
      Default community health files for Sanger
      0•0•0•0•Updated Sep 12, 2024Sep 12, 2024

    • record_loader

      Public
      Easily manage seeding and updating data from simple yml files
      Ruby
      •
      Other
      •1•0•0•7•Updated Sep 5, 2024Sep 5, 2024