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v3.0.0 - Major Release
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@nservant nservant released this 21 Dec 18:36
· 36 commits to master since this release
v3.0.0
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CHANGES IN VERSION 3.0.0

NEW FEATURES

  • vcf file can be zipped in vcf.gz
  • Add a Dockerfile for automatic Docker build on DockerHub
  • Set up Travis continuous testing
  • iced has been removed from HiC-Pro and is now an independant module
  • Add a environment.yml file for installation with conda
  • HiC-Pro is now based on python3. /!\ Python2 is no longer maintained /!\

SIGNIFICANT USER-VISIBLE CHANGES

  • SORT_RAM is not divided by N_CPU for samtools (#369)
  • Fix bug in make_viewpoints.py if multiple viewpoints are specified in the bed file
  • Add '--float' option for hicpro2higlass to manage normalized Hi-C data
  • Update of the Singularity image
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