Merge branch 'master' into devel

nservant · Dec 21, 2020 · b6ac648 · b6ac648
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 Yes, the LIGATION_SITE variable from the configuration file can contain multiple ligation motifs (comma separated).
 
 Regarding the Arima kit, as there is two restiction motifs (^GATC and G^ANTC), the possible ligation motifs should be GATCGATC,GANTGATC,GANTANTC,GATCANTC.
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 Leading to 25 possible ligation motifs when the 'N' are replaced by 'A', 'C', 'G', 'T'.
 Since HiC-Pro version 2.11.3, 'N' base are automatically recognized.
 For older version, please specify all possible ligation motifs.