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@databio @uvasomrc @UVADS @uvasds-systems

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nmagee/README.md

Hi there 👋

I teach systems at the University of Virginia's School of Data Science. This means tools, platforms and infrastructure — containers, cloud, Kubernetes, HPC, GPUs — as well as a variety of databases and managed services. My work centers on designing and building systems in support of computational research, focusing heavily on containers, CI/CD, and automation/orchestration for bioinformatic, genomic, and other research workflows.

Here are some courses I have taught or am designing:

  • DS1002 Programming for Data Science (DS minors)
  • DS2002 Data Science Systems (DS minors)
  • DS2022 Systems I - Introduction to Computing (new, BSDS majors)
  • DS3022 Systems II - Data Engineering (new, BSDS majors)
  • DS4523 Advanced Topics in Systems (new, BSDS majors)
  • DSXXXX TBD
  • CS4740 Cloud Computing (CS majors)

Things that interest me lately:

More information:

Pinned Loading

  1. UVADS/git-basics UVADS/git-basics Public

    Set up, configure, and work with source control tools.

    SCSS 1

  2. uvasds-systems/DS2022 uvasds-systems/DS2022 Public

    Forked from UVADS/DS2022

    Course material for DS2022 Systems I: Introduction to Computing

    Python 1 78

  3. aws-snippets aws-snippets Public

    Sample CloudFormation templates for class.

    Python 1

  4. boto3-examples boto3-examples Public

    Python 2

  5. databio/LOLAweb databio/LOLAweb Public

    An interactive Shiny web application for genomic interval enrichment analysis using LOLA.

    R 16 2