handle cases where the directory path contains the name of the component

nf-core · Aug 29, 2024 · aa2a417 · aa2a417
1 parent 4e385ab
commit aa2a417
Showing 1 changed file with 6 additions and 1 deletion.
diff --git a/nf_core/components/nfcore_component.py b/nf_core/components/nfcore_component.py
@@ -64,7 +64,12 @@ def __init__(
             self.process_name = ""
             self.environment_yml: Optional[Path] = Path(self.component_dir, "environment.yml")
 
-            repo_dir = self.component_dir.parts[: self.component_dir.parts.index(self.component_name.split("/")[0])][-1]
+            name_index = (
+                len(self.component_dir.parts)
+                - 1
+                - self.component_dir.parts[::-1].index(self.component_name.split("/")[0])
+            )
+            repo_dir = self.component_dir.parts[:name_index][-1]
             self.org = repo_dir
             self.nftest_testdir = Path(self.component_dir, "tests")
             self.nftest_main_nf = Path(self.nftest_testdir, "main.nf.test")