Prettier

assets/schema_input.json

@@ -11,25 +11,19 @@
                 "type": "string",
                 "pattern": "^\\S+$",
                 "errorMessage": "Sample name must be provided and cannot contain spaces",
-                "meta": [
-                    "id"
-                ]
+                "meta": ["id"]
             },
             "condition": {
                 "type": "string",
                 "pattern": "^\\S+$",
                 "errorMessage": "Condition name must be provided and cannot contain spaces",
-                "meta": [
-                    "condition"
-                ]
+                "meta": ["condition"]
             },
             "assay": {
                 "type": "string",
                 "pattern": "^\\S+$",
                 "errorMessage": "Assay name must be provided and cannot contain spaces",
-                "meta": [
-                    "assay"
-                ]
+                "meta": ["assay"]
             },
             "peak_file": {
                 "type": "string",
@@ -42,33 +36,22 @@
                 "type": "boolean",
                 "default": true,
                 "errorMessage": "footprinting must be a boolean value",
-                "meta": [
-                    "footprinting"
-                ]
+                "meta": ["footprinting"]
             },
             "include_original": {
                 "type": "boolean",
                 "default": true,
                 "errorMessage": "include_original must be a boolean value",
-                "meta": [
-                    "include_original"
-                ]
+                "meta": ["include_original"]
             },
             "max_peak_gap": {
                 "type": "integer",
                 "default": 500,
                 "minimum": 0,
                 "errorMessage": "max_peak_gap must be a positive integer",
-                "meta": [
-                    "max_peak_gap"
-                ]
+                "meta": ["max_peak_gap"]
             }
         },
-        "required": [
-            "sample",
-            "condition",
-            "assay",
-            "peak_file"
-        ]
+        "required": ["sample", "condition", "assay", "peak_file"]
     }
-}
+}

nextflow_schema.json

@@ -10,10 +10,7 @@
             "type": "object",
             "fa_icon": "fas fa-terminal",
             "description": "Define where the pipeline should find input data and save output data.",
-            "required": [
-                "input",
-                "outdir"
-            ],
+            "required": ["input", "outdir"],
             "properties": {
                 "input": {
                     "type": "string",
@@ -381,14 +378,7 @@
                     "description": "Method used to save pipeline results to output directory.",
                     "help_text": "The Nextflow `publishDir` option specifies which intermediate files should be saved to the output directory. This option tells the pipeline what method should be used to move these files. See [Nextflow docs](https://www.nextflow.io/docs/latest/process.html#publishdir) for details.",
                     "fa_icon": "fas fa-copy",
-                    "enum": [
-                        "symlink",
-                        "rellink",
-                        "link",
-                        "copy",
-                        "copyNoFollow",
-                        "move"
-                    ],
+                    "enum": ["symlink", "rellink", "link", "copy", "copyNoFollow", "move"],
                     "hidden": true
                 },
                 "email_on_fail": {
@@ -478,4 +468,4 @@
             "$ref": "#/$defs/generic_options"
         }
     ]
-}
+}