Collect more version outputs

nf-core · Mar 18, 2024 · 1a646b2 · 1a646b2
1 parent 598e41f
commit 1a646b2
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Showing 2 changed files with 5 additions and 1 deletion.
diff --git a/subworkflows/local/peaks.nf b/subworkflows/local/peaks.nf
@@ -1,7 +1,6 @@
 // Modules
 include { GAWK as CLEAN_BED               } from '../../modules/nf-core/gawk/main'
 include { BEDTOOLS_SORT as SORT_PEAKS     } from '../../modules/nf-core/bedtools/sort/main'
-include { BEDTOOLS_SUBTRACT as BLACKLIST  } from '../../modules/nf-core/bedtools/subtract/main'
 include { STARE                           } from '../../modules/local/stare/main'
 include { COMBINE_TABLES as AFFINITY_MEAN } from '../../modules/local/combine_tables/main'
 include { COMBINE_TABLES as AFFINITY_RATIO} from '../../modules/local/combine_tables/main'

diff --git a/subworkflows/local/ranking.nf b/subworkflows/local/ranking.nf
@@ -32,6 +32,11 @@ workflow RANKING {
                                                 .map{ rankings -> [[id: "all"], rankings]}
     )
 
+    ch_versions = ch_versions.mix(TF_TG_SCORE.out.versions,
+                                  CREATE_RANKING.out.versions,
+                                  COMBINE_RANKINGS.out.versions
+    )
+
 
     emit:
     assay_specific = CREATE_RANKING.out.ranking