Update modules

nf-core · Oct 13, 2024 · 019487b · 019487b
1 parent 3092c82
commit 019487b
Showing 1 changed file with 12 additions and 16 deletions.
diff --git a/modules.json b/modules.json
@@ -8,8 +8,7 @@
                     "bioawk": {
                         "branch": "master",
                         "git_sha": "666652151335353eef2fcd58880bcef5bc2928e1",
-                        "installed_by": ["modules"],
-                        "patch": "modules/nf-core/bioawk/bioawk.diff"
+                        "installed_by": ["modules"]
                     },
                     "blat": {
                         "branch": "master",
@@ -49,7 +48,7 @@
                     "fastp": {
                         "branch": "master",
                         "git_sha": "666652151335353eef2fcd58880bcef5bc2928e1",
-                        "installed_by": ["fastq_fastqc_umitools_fastp", "modules"]
+                        "installed_by": ["fastq_fastqc_umitools_fastp"]
                     },
                     "fastqc": {
                         "branch": "master",
@@ -104,27 +103,27 @@
                     "samtools/flagstat": {
                         "branch": "master",
                         "git_sha": "b13f07be4c508d6ff6312d354d09f2493243e208",
-                        "installed_by": ["bam_stats_samtools", "modules"]
+                        "installed_by": ["bam_stats_samtools"]
                     },
                     "samtools/idxstats": {
                         "branch": "master",
                         "git_sha": "b13f07be4c508d6ff6312d354d09f2493243e208",
-                        "installed_by": ["bam_stats_samtools", "modules"]
+                        "installed_by": ["bam_stats_samtools"]
                     },
                     "samtools/index": {
                         "branch": "master",
                         "git_sha": "b13f07be4c508d6ff6312d354d09f2493243e208",
-                        "installed_by": ["bam_sort_stats_samtools", "modules"]
+                        "installed_by": ["bam_sort_stats_samtools"]
                     },
                     "samtools/sort": {
                         "branch": "master",
                         "git_sha": "b7800db9b069ed505db3f9d91b8c72faea9be17b",
-                        "installed_by": ["bam_sort_stats_samtools", "modules"]
+                        "installed_by": ["bam_sort_stats_samtools"]
                     },
                     "samtools/stats": {
                         "branch": "master",
                         "git_sha": "b13f07be4c508d6ff6312d354d09f2493243e208",
-                        "installed_by": ["bam_stats_samtools", "modules"]
+                        "installed_by": ["bam_stats_samtools"]
                     },
                     "seqcluster/collapse": {
                         "branch": "master",
@@ -139,8 +138,7 @@
                     "seqkit/grep": {
                         "branch": "master",
                         "git_sha": "666652151335353eef2fcd58880bcef5bc2928e1",
-                        "installed_by": ["modules"],
-                        "patch": "modules/nf-core/seqkit/grep/seqkit-grep.diff"
+                        "installed_by": ["modules"]
                     },
                     "seqkit/replace": {
                         "branch": "master",
@@ -155,7 +153,7 @@
                     "umitools/extract": {
                         "branch": "master",
                         "git_sha": "666652151335353eef2fcd58880bcef5bc2928e1",
-                        "installed_by": ["fastq_fastqc_umitools_fastp", "modules"]
+                        "installed_by": ["fastq_fastqc_umitools_fastp"]
                     },
                     "untar": {
                         "branch": "master",
@@ -202,11 +200,9 @@
                         "installed_by": ["subworkflows"]
                     },
                     "utils_nfschema_plugin": {
-                        "utils_nfschema_plugin": {
-                            "branch": "master",
-                            "git_sha": "bbd5a41f4535a8defafe6080e00ea74c45f4f96c",
-                            "installed_by": ["subworkflows"]
-                        }
+                        "branch": "master",
+                        "git_sha": "bbd5a41f4535a8defafe6080e00ea74c45f4f96c",
+                        "installed_by": ["subworkflows"]
                     }
                 }
             }