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Make it work without specifying GTF file #922

Make it work without specifying GTF file

Make it work without specifying GTF file #922

Triggered via pull request April 30, 2024 13:58
@grstgrst
synchronize #322
fix-without-gtf
Status Failure
Total duration 6h 0m 47s
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ci.yml

on: pull_request
Matrix: test
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4 errors and 8 warnings
aligner: cellrangermulti ; NF: 23.04.0
The job running on runner GitHub Actions 39 has exceeded the maximum execution time of 360 minutes.
aligner: cellrangermulti ; NF: 23.04.0
The operation was canceled.
aligner: cellrangermulti ; NF: latest-everything
The job running on runner GitHub Actions 23 has exceeded the maximum execution time of 360 minutes.
aligner: cellrangermulti ; NF: latest-everything
The operation was canceled.
aligner: kallisto ; NF: 23.04.0
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: nf-core/setup-nextflow@v1, actions/cache@v3, mikepenz/action-junit-report@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
aligner: kallisto ; NF: latest-everything
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: nf-core/setup-nextflow@v1, actions/cache@v3, mikepenz/action-junit-report@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
aligner: alevin ; NF: 23.04.0
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: nf-core/setup-nextflow@v1, actions/cache@v3, mikepenz/action-junit-report@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
aligner: alevin ; NF: latest-everything
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: nf-core/setup-nextflow@v1, actions/cache@v3, mikepenz/action-junit-report@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
aligner: star ; NF: 23.04.0
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: nf-core/setup-nextflow@v1, actions/cache@v3, mikepenz/action-junit-report@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
aligner: cellranger ; NF: 23.04.0
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: nf-core/setup-nextflow@v1, actions/cache@v3, mikepenz/action-junit-report@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
aligner: cellranger ; NF: latest-everything
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: nf-core/setup-nextflow@v1, actions/cache@v3, mikepenz/action-junit-report@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
aligner: star ; NF: latest-everything
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: nf-core/setup-nextflow@v1, actions/cache@v3, mikepenz/action-junit-report@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.