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Standardize conversion workflow #1034

Standardize conversion workflow

Standardize conversion workflow #1034

Triggered via pull request September 26, 2024 07:25
Status Cancelled
Total duration 13m 8s
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ci.yml

on: pull_request
Matrix: test
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20 errors and 7 warnings
nf.test-dataset_kallisto_aligner: nf#L1
Assertion failed: 7 of 12 assertions failed
aligner: kallisto ; NF: latest-everything
Process completed with exit code 1.
nf.test-dataset_alevin_aligner: nf#L1
Assertion failed: 9 of 11 assertions failed
aligner: alevin ; NF: 23.04.0
Process completed with exit code 1.
nf.test-dataset_alevin_aligner: nf#L1
Assertion failed: 10 of 11 assertions failed
aligner: alevin ; NF: latest-everything
Process completed with exit code 1.
nf.test-dataset_kallisto_aligner: nf#L1
Assertion failed: 7 of 12 assertions failed
aligner: kallisto ; NF: 23.04.0
Process completed with exit code 1.
nf.test-dataset_star_aligner: nf#L1
Assertion failed: 4 of 12 assertions failed
aligner: star ; NF: latest-everything
Process completed with exit code 1.
nf.test-dataset_star_aligner: nf#L1
Assertion failed: 4 of 12 assertions failed
aligner: star ; NF: 23.04.0
Process completed with exit code 1.
nf.test-dataset_cellranger_aligner: nf#L1
Assertion failed: 8 of 13 assertions failed
aligner: cellranger ; NF: latest-everything
Process completed with exit code 1.
aligner: cellrangermulti ; NF: 23.04.0
Canceling since a higher priority waiting request for 'nf-core CI-369' exists
aligner: cellrangermulti ; NF: 23.04.0
The operation was canceled.
aligner: cellrangermulti ; NF: latest-everything
Canceling since a higher priority waiting request for 'nf-core CI-369' exists
aligner: cellrangermulti ; NF: latest-everything
The operation was canceled.
aligner: cellranger ; NF: 23.04.0
Canceling since a higher priority waiting request for 'nf-core CI-369' exists
aligner: cellranger ; NF: 23.04.0
The operation was canceled.
aligner: kallisto ; NF: latest-everything
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
aligner: alevin ; NF: 23.04.0
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
aligner: alevin ; NF: latest-everything
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
aligner: kallisto ; NF: 23.04.0
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
aligner: star ; NF: latest-everything
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
aligner: star ; NF: 23.04.0
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
aligner: cellranger ; NF: latest-everything
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/