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patch sortmerna to 4.3.7 for ARM compatibility #59

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patch sortmerna to 4.3.7 for ARM compatibility

patch sortmerna to 4.3.7 for ARM compatibility #59

Triggered via pull request October 22, 2024 11:39
@pinin4fjordspinin4fjords
synchronize #1424
Status Success
Total duration 40s
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template_version_comment.yml

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12 errors
Test Process SORTMERNA.sarscov2 indexing only: Test Process SORTMERNA#L1
Assertion failed: 1 of 3 assertions failed
Test Process SORTMERNA.sarscov2 single_end: Test Process SORTMERNA#L1
Assertion failed: 1 of 6 assertions failed
Test Process SORTMERNA.sarscov2 paired_end: Test Process SORTMERNA#L1
Assertion failed: 1 of 6 assertions failed
Test Process SORTMERNA.sarscov2 single_end premade_index: Test Process SORTMERNA#L1
Assertion failed: 1 of 6 assertions failed
Test Process SORTMERNA.sarscov2 indexing only: Test Process SORTMERNA#L1
Assertion failed: 1 of 3 assertions failed
Test Process SORTMERNA.sarscov2 single_end: Test Process SORTMERNA#L1
Assertion failed: 1 of 6 assertions failed
Test Process SORTMERNA.sarscov2 paired_end: Test Process SORTMERNA#L1
Assertion failed: 1 of 6 assertions failed
Test Process SORTMERNA.sarscov2 single_end premade_index: Test Process SORTMERNA#L1
Assertion failed: 1 of 6 assertions failed
Test pipeline with ribosomal RNA removal.Params: --remove_ribo_rna: Test pipeline with ribosomal RNA removal#L1
Assertion failed: 1 of 2 assertions failed
Test pipeline with ribosomal RNA removal.Params: --remove_ribo_rna - stub: Test pipeline with ribosomal RNA removal#L1
Assertion failed: 1 of 2 assertions failed
Test pipeline with ribosomal RNA removal.Params: --remove_ribo_rna: Test pipeline with ribosomal RNA removal#L1
Assertion failed: 1 of 2 assertions failed
Test pipeline with ribosomal RNA removal.Params: --remove_ribo_rna - stub: Test pipeline with ribosomal RNA removal#L1
Assertion failed: 1 of 2 assertions failed