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fix-linting.yml
102 workflow runs
102 workflow runs

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Circos error within bakta Fix linting from a comment #27: Issue comment #29 (comment) created by zachary-foster
October 17, 2023 16:22 3s
October 17, 2023 16:22 3s
Optional columns with commas cause incorrect CSV parsing Fix linting from a comment #26: Issue comment #30 (comment) created by zachary-foster
October 16, 2023 21:22 3s
October 16, 2023 21:22 3s
Ensure column order in input spreadsheet does not matter Fix linting from a comment #25: Issue comment #24 (comment) created by zachary-foster
October 13, 2023 16:57 2s
October 13, 2023 16:57 2s
Fix linting from a comment Fix linting from a comment #24: created by zachary-foster
October 13, 2023 15:48 3s
October 13, 2023 15:48 3s
Circos error within bakta Fix linting from a comment #23: Issue comment #29 (comment) created by zachary-foster
October 12, 2023 16:55 3s
October 12, 2023 16:55 3s
sourmash not found Fix linting from a comment #22: Issue comment #12 (comment) created by zachary-foster
October 11, 2023 23:32 2s
October 11, 2023 23:32 2s
Glitch at the download genome step Fix linting from a comment #21: Issue comment #13 (comment) created by zachary-foster
October 11, 2023 23:31 2s
October 11, 2023 23:31 2s
Error in dump software versions Fix linting from a comment #20: Issue comment #14 (comment) created by zachary-foster
October 11, 2023 23:30 2s
October 11, 2023 23:30 2s
Not all subworkflows are collecting version info Fix linting from a comment #19: Issue comment #19 (comment) created by zachary-foster
October 11, 2023 23:28 2s
October 11, 2023 23:28 2s
DOWNLOAD_ASSEMBLIES error Fix linting from a comment #18: Issue comment #25 (comment) created by zachary-foster
October 11, 2023 23:28 2s
October 11, 2023 23:28 2s
weird error when downloading genomes? Fix linting from a comment #17: Issue comment #27 (comment) created by zachary-foster
October 11, 2023 23:27 3s
October 11, 2023 23:27 3s
DUMPSOFTWAREVERSIONS! error Fix linting from a comment #16: Issue comment #28 (comment) created by zachary-foster
October 10, 2023 20:22 4s
October 10, 2023 20:22 4s
picard error - can't find the command Fix linting from a comment #15: Issue comment #26 (comment) created by zachary-foster
October 4, 2023 17:07 3s
October 4, 2023 17:07 3s
picard error - can't find the command Fix linting from a comment #14: Issue comment #26 (comment) created by cahuparo
October 3, 2023 23:47 3s
October 3, 2023 23:47 3s
Check what happens when either the reference or reference_id columns are empty Fix linting from a comment #13: Issue comment #22 (comment) created by marinawitherell
October 2, 2023 18:12 2s
October 2, 2023 18:12 2s
Error picking assemblies Fix linting from a comment #12: Issue comment #9 (comment) created by zachary-foster
September 20, 2023 16:57 2s
September 20, 2023 16:57 2s
Rmarkdown report outline Fix linting from a comment #11: Issue comment #8 (comment) created by zachary-foster
September 20, 2023 16:55 2s
September 20, 2023 16:55 2s
Add read subsampling step to each major subworkflow based on reference genome size Fix linting from a comment #10: Issue comment #6 (comment) created by zachary-foster
September 20, 2023 16:54 2s
September 20, 2023 16:54 2s
Remove code that adds "_T#" to sample IDs Fix linting from a comment #9: Issue comment #5 (comment) created by zachary-foster
September 20, 2023 16:53 3s
September 20, 2023 16:53 3s
fastq1 and fastq2 file type error Fix linting from a comment #8: Issue comment #18 (comment) created by zachary-foster
September 19, 2023 18:14 3s
September 19, 2023 18:14 3s
Glitch at the download genome step Fix linting from a comment #7: Issue comment #13 (comment) created by zachary-foster
September 18, 2023 22:26 3s
September 18, 2023 22:26 3s
Error picking assemblies Fix linting from a comment #6: Issue comment #9 (comment) created by zachary-foster
August 9, 2023 22:18 2s
August 9, 2023 22:18 2s
Add subworkflow for selecting a reference Fix linting from a comment #5: Issue comment #1 (comment) created by zachary-foster
August 5, 2023 19:25 2s
August 5, 2023 19:25 2s
Add check to make sure that sample ID are unique Fix linting from a comment #4: Issue comment #3 (comment) created by zachary-foster
August 5, 2023 19:24 3s
August 5, 2023 19:24 3s
Add column to input to group samples Fix linting from a comment #3: Issue comment #4 (comment) created by zachary-foster
August 5, 2023 19:24 1s
August 5, 2023 19:24 1s