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Changing json names to show strain name #9

Merged
merged 2 commits into from
Aug 20, 2024
Merged

Changing json names to show strain name #9

merged 2 commits into from
Aug 20, 2024

Commits on Aug 19, 2024

  1. given the presence of recombination in Oropouche, it is ideal to be a… 

    …ble to look at the different segment trees via tanglegrams. Currently, with accession number being the main ID, it is not possible to do so. This commit excludes duplicated sequences and then changes the node.name for in the auspice json from genbank acession number to strain name, allowing for the creation of tanglegrams
    @miparedes
    miparedes committed Aug 19, 2024
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  2. adding in duplicated seqs into exclude.txt

    @miparedes
    miparedes committed Aug 19, 2024
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    18bbe32 View commit details
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