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Update ingest to accommodate oropouche segments #1

Merged
merged 3 commits into from
Aug 12, 2024
Merged

Update ingest to accommodate oropouche segments #1

merged 3 commits into from
Aug 12, 2024

Commits on Jul 30, 2024

  1. modifying the pathogen repo guide to take in oropouche specifically b… 

    …y changing the config.yaml file
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    miparedes committed Jul 30, 2024
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  2. following the nextstrain lassa fever example, the ingest was changed … 

    …in order to accommidate the three different segments of oropouche virus
    @miparedes
    miparedes committed Jul 30, 2024
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Commits on Aug 12, 2024

  1. cleaning up the ingest rules based on nextstrain team feedback

    @miparedes
    miparedes committed Aug 12, 2024
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