Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

ExternalProject SUNDIALS 3.2.1 #1960

Open
wants to merge 116 commits into
base: master
Choose a base branch
from
Open

ExternalProject SUNDIALS 3.2.1 #1960

wants to merge 116 commits into from

Commits on Aug 20, 2022

  1. ExternalProject SUNDIALS 3.2.1 

    * include work from cvode3 branch
    @alexsavulescu
    alexsavulescu committed Aug 20, 2022
    Configuration menu
    Copy the full SHA
    4581ab4 View commit details
    Browse the repository at this point in the history

  2. ninja needs BUILD_BYPRODUCTS in ExternalProject_Add

    @alexsavulescu
    alexsavulescu committed Aug 20, 2022
    Configuration menu
    Copy the full SHA
    0a3692c View commit details
    Browse the repository at this point in the history

Commits on Dec 11, 2022

  1. Merge branch 'master' into slds

    @alkino
    alkino authored Dec 11, 2022
    Configuration menu
    Copy the full SHA
    d38f489 View commit details
    Browse the repository at this point in the history

  2. Format

    @alkino
    alkino committed Dec 11, 2022
    Configuration menu
    Copy the full SHA
    f36e64a View commit details
    Browse the repository at this point in the history

Commits on May 1, 2023

  1. Merge remote-tracking branch 'origin/master'

    @alkino
    alkino committed May 1, 2023
    Configuration menu
    Copy the full SHA
    daf0008 View commit details
    Browse the repository at this point in the history

  2. Format

    @alkino
    alkino committed May 1, 2023
    Configuration menu
    Copy the full SHA
    857bd86 View commit details
    Browse the repository at this point in the history

  3. Fix name of SUNR functions

    @alkino
    alkino committed May 1, 2023
    Configuration menu
    Copy the full SHA
    152e86f View commit details
    Browse the repository at this point in the history

Commits on May 4, 2023

  1. Fix segfault (missing IDASetUserData) and N_VSpace_... prototypes.

    @nrnhines
    nrnhines committed May 4, 2023
    Configuration menu
    Copy the full SHA
    e613da1 View commit details
    Browse the repository at this point in the history

  2. Build sundials with the same type than nrn

    @alkino
    alkino committed May 4, 2023
    Configuration menu
    Copy the full SHA
    f2c6b4d View commit details
    Browse the repository at this point in the history

  3. Fully remove sundials

    @alkino
    alkino committed May 4, 2023
    Configuration menu
    Copy the full SHA
    5c5ae92 View commit details
    Browse the repository at this point in the history

  4. Merge remote-tracking branch 'origin/master'

    @alkino
    alkino committed May 4, 2023
    Configuration menu
    Copy the full SHA
    3341256 View commit details
    Browse the repository at this point in the history

  5. IDASetStopTime should not be called for interpolation.

    @nrnhines
    nrnhines committed May 4, 2023
    Configuration menu
    Copy the full SHA
    9a38810 View commit details
    Browse the repository at this point in the history

Commits on May 5, 2023

  1. ctest -R netpar passes. MPI_Comm not available from cvodeobj.cpp

    @nrnhines
    nrnhines committed May 5, 2023
    Configuration menu
    Copy the full SHA
    e0b3ef1 View commit details
    Browse the repository at this point in the history

  2. Revert "ctest -R netpar passes. MPI_Comm not available from cvodeobj.… 

    …cpp"

This reverts commit e0b3ef1.
    @nrnhines
    nrnhines committed May 5, 2023
    Configuration menu
    Copy the full SHA
    5a11a3f View commit details
    Browse the repository at this point in the history

  3. ctest -R netpar passes. Works with NRNMPI_DYNAMICLOAD.

    @nrnhines
    nrnhines committed May 5, 2023
    Configuration menu
    Copy the full SHA
    aeb1684 View commit details
    Browse the repository at this point in the history

  4. Problem translating long long foo for NRNMPI_DYNAMICLOAD

    @nrnhines
    nrnhines committed May 5, 2023
    Configuration menu
    Copy the full SHA
    00b2c66 View commit details
    Browse the repository at this point in the history

Commits on May 6, 2023

  1. update nrntest (cvode version 3 and no hhtable)

    @nrnhines
    nrnhines committed May 6, 2023
    Configuration menu
    Copy the full SHA
    174036f View commit details
    Browse the repository at this point in the history

Commits on May 11, 2023

  1. Merge branch 'master' into slds

    @alkino
    alkino authored May 11, 2023
    Configuration menu
    Copy the full SHA
    554b326 View commit details
    Browse the repository at this point in the history

Commits on May 15, 2023

  1. Selected messages from old digest-debug branch 

    Print digest of cvode f(y,t) and solvex(b,...)
  cmake -DNRN_DIGEST=ON
  nrn_digest() starts the accumulation of cvode digest info.
  nrn_digest("filename") prints accumulated cvode digest info.
  filename format is:
    message threadid t t(in exact hex format) digest
    where digest is the first 16 hex characters of the SHA1 hash
    of the double* array indicated by the message.

-DNRN_ENABLE_ARCH_INDEP_EXP_POW=ON (default OFF)
  Provides h.use_exp_pow_precision(style)
  style = 0 means use normal machine IEEE precision for exp(x) and pow(x,y)
  style = 1 means use 53 bit mpfr
  style = 2 means use IEEE but truncate to 32 bit precision.

   sundials uses hoc_pow.

   digest format has a f(y,t) call count.

Use 32bit mantissa round for hoc_Exp (as well as hoc_pow).

See if pow is the culprit (round mantissa to 32 bit accuracy).

print y and ydot for first t>0

%a format different between linux and windows
    @nrnhines
    nrnhines committed May 15, 2023
    Configuration menu
    Copy the full SHA
    56a1134 View commit details
    Browse the repository at this point in the history

  2. libcrypt for mac

    @nrnhines
    nrnhines committed May 15, 2023
    Configuration menu
    Copy the full SHA
    7e6761c View commit details
    Browse the repository at this point in the history

Commits on May 17, 2023

  1. Merge branch 'master' into slds

    @nrnhines
    nrnhines authored May 17, 2023
    Configuration menu
    Copy the full SHA
    7176f4a View commit details
    Browse the repository at this point in the history

  2. No need link libsundials_nvecparallel.a

    @nrnhines
    nrnhines committed May 17, 2023
    Configuration menu
    Copy the full SHA
    824732b View commit details
    Browse the repository at this point in the history

  3. Merge branch 'master' into slds

    @nrnhines
    nrnhines authored May 17, 2023
    Configuration menu
    Copy the full SHA
    a2044cb View commit details
    Browse the repository at this point in the history

  4. format

    @nrnhines
    nrnhines committed May 17, 2023
    Configuration menu
    Copy the full SHA
    5e0162b View commit details
    Browse the repository at this point in the history

  5. Left out }

    @nrnhines
    nrnhines committed May 17, 2023
    Configuration menu
    Copy the full SHA
    c60a3eb View commit details
    Browse the repository at this point in the history

  6. Revert "No need link libsundials_nvecparallel.a" 

    This reverts commit 824732b.
    @nrnhines
    nrnhines committed May 17, 2023
    Configuration menu
    Copy the full SHA
    fe5c851 View commit details
    Browse the repository at this point in the history

Commits on May 25, 2023

  1. Merge branch 'master' into slds

    @nrnhines
    nrnhines authored May 25, 2023
    Configuration menu
    Copy the full SHA
    d0bf3e7 View commit details
    Browse the repository at this point in the history

Commits on May 26, 2023

  1. "major.minor.patch" = h.CVode().version()

    @nrnhines
    nrnhines committed May 26, 2023
    Configuration menu
    Copy the full SHA
    65b13f5 View commit details
    Browse the repository at this point in the history

  2. eliminate pytest warning

    @nrnhines
    nrnhines committed May 26, 2023
    Configuration menu
    Copy the full SHA
    12ddfb5 View commit details
    Browse the repository at this point in the history

Commits on May 28, 2023

  1. CVode 3.2.1 json data for test_nrntest_fast.py

    @nrnhines
    nrnhines committed May 28, 2023
    Configuration menu
    Copy the full SHA
    84f05af View commit details
    Browse the repository at this point in the history

Commits on Jun 1, 2023

  1. Merge branch 'master' into slds

    @alkino
    alkino authored Jun 1, 2023
    Configuration menu
    Copy the full SHA
    ffdb5fb View commit details
    Browse the repository at this point in the history

  2. Merge remote-tracking branch 'origin/master'

    @alkino
    alkino committed Jun 1, 2023
    Configuration menu
    Copy the full SHA
    34062f3 View commit details
    Browse the repository at this point in the history

  3. sundials nvecparallel needs MPI

    @alkino
    alkino committed Jun 1, 2023
    Configuration menu
    Copy the full SHA
    dbfc76f View commit details
    Browse the repository at this point in the history

  4. Merge remote-tracking branch 'origin/slds'

    @alkino
    alkino committed Jun 1, 2023
    Configuration menu
    Copy the full SHA
    06f2bc3 View commit details
    Browse the repository at this point in the history

  5. Fix FindSUNDIALS.cmake

    @alkino
    alkino committed Jun 1, 2023
    Configuration menu
    Copy the full SHA
    ff9bb0f View commit details
    Browse the repository at this point in the history

  6. fix linkage

    @alkino
    alkino committed Jun 1, 2023
    Configuration menu
    Copy the full SHA
    1a84a72 View commit details
    Browse the repository at this point in the history

  7. Try to clean linkage with sundials

    @alkino
    alkino committed Jun 1, 2023
    Configuration menu
    Copy the full SHA
    910d9ac View commit details
    Browse the repository at this point in the history

  8. Format

    @alkino
    alkino committed Jun 1, 2023
    Configuration menu
    Copy the full SHA
    7e9ddf1 View commit details
    Browse the repository at this point in the history

  9. Don't use corenrn if corenrn not set

    @alkino
    alkino committed Jun 1, 2023
    Configuration menu
    Copy the full SHA
    5ac7685 View commit details
    Browse the repository at this point in the history

  10. Fix fix and fix

    @alkino
    alkino committed Jun 1, 2023
    Configuration menu
    Copy the full SHA
    009a914 View commit details
    Browse the repository at this point in the history

  11. Format

    @alkino
    alkino committed Jun 1, 2023
    Configuration menu
    Copy the full SHA
    53683bf View commit details
    Browse the repository at this point in the history

  12. trick depends

    @alkino
    alkino committed Jun 1, 2023
    Configuration menu
    Copy the full SHA
    9d6b033 View commit details
    Browse the repository at this point in the history

  13. try to help sundials to find MPI

    @alkino
    alkino committed Jun 1, 2023
    Configuration menu
    Copy the full SHA
    7dbf02f View commit details
    Browse the repository at this point in the history

Commits on Jun 2, 2023

  1. set LIBDIR

    @alkino
    alkino committed Jun 2, 2023
    Configuration menu
    Copy the full SHA
    6f92bd5 View commit details
    Browse the repository at this point in the history

  2. -tp=haswell is not accepted by sundials

    @alkino
    alkino committed Jun 2, 2023
    Configuration menu
    Copy the full SHA
    6a4e401 View commit details
    Browse the repository at this point in the history

  3. Merge branch 'master' into slds

    @alkino
    alkino authored Jun 2, 2023
    Configuration menu
    Copy the full SHA
    0eda725 View commit details
    Browse the repository at this point in the history

Commits on Jun 12, 2023

  1. Merge remote-tracking branch 'origin/master'

    @alkino
    alkino committed Jun 12, 2023
    Configuration menu
    Copy the full SHA
    f9749ca View commit details
    Browse the repository at this point in the history

  2. Remove too more spaces

    @alkino
    alkino committed Jun 12, 2023
    Configuration menu
    Copy the full SHA
    cfe9ef1 View commit details
    Browse the repository at this point in the history

  3. Merge remote-tracking branch 'origin/master'

    @alkino
    alkino committed Jun 12, 2023
    Configuration menu
    Copy the full SHA
    6279e08 View commit details
    Browse the repository at this point in the history

  4. CVodeSetFdata => CVodeSetUserData

    @alkino
    alkino committed Jun 12, 2023
    Configuration menu
    Copy the full SHA
    858b829 View commit details
    Browse the repository at this point in the history

Commits on Nov 4, 2023

  1. Merge branch 'master' into slds

    @nrnhines
    nrnhines committed Nov 4, 2023
    Configuration menu
    Copy the full SHA
    67b677c View commit details
    Browse the repository at this point in the history

Commits on Nov 5, 2023

  1. eliminate some compiler warnings

    @nrnhines
    nrnhines committed Nov 5, 2023
    Configuration menu
    Copy the full SHA
    3777c05 View commit details
    Browse the repository at this point in the history

  2. update nrntest to master merged hines/update-t12

    @nrnhines
    nrnhines committed Nov 5, 2023
    Configuration menu
    Copy the full SHA
    8f17f69 View commit details
    Browse the repository at this point in the history

Commits on Dec 30, 2023

  1. Merge branch 'master' into slds

    @nrnhines
    nrnhines committed Dec 30, 2023
    Configuration menu
    Copy the full SHA
    93be65e View commit details
    Browse the repository at this point in the history

  2. on previous master merge, resolve conflict incorrectly

    @nrnhines
    nrnhines committed Dec 30, 2023
    Configuration menu
    Copy the full SHA
    30ee751 View commit details
    Browse the repository at this point in the history

Commits on Mar 9, 2024

  1. Merge branch 'master' into slds

    @nrnhines
    nrnhines committed Mar 9, 2024
    Configuration menu
    Copy the full SHA
    8c46a46 View commit details
    Browse the repository at this point in the history

Commits on May 7, 2024

  1. Merge remote-tracking branch 'origin/master'

    @alkino
    alkino committed May 7, 2024
    Configuration menu
    Copy the full SHA
    9414fb6 View commit details
    Browse the repository at this point in the history

Commits on Oct 1, 2024

  1. Merge branch 'master' into slds

    @nrnhines
    nrnhines committed Oct 1, 2024
    Configuration menu
    Copy the full SHA
    7cf79d6 View commit details
    Browse the repository at this point in the history

Commits on Oct 3, 2024

  1. some files missing in NRN_PARALLEL_SRC_FILES

    @nrnhines
    nrnhines committed Oct 3, 2024
    Configuration menu
    Copy the full SHA
    be164eb View commit details
    Browse the repository at this point in the history

  2. ninja format

    @nrnhines
    nrnhines committed Oct 3, 2024
    Configuration menu
    Copy the full SHA
    b40997a View commit details
    Browse the repository at this point in the history

  3. Merge branch 'master' into slds (master for test_nlayer.py conflict)

    @nrnhines
    nrnhines committed Oct 3, 2024
    Configuration menu
    Copy the full SHA
    30c9890 View commit details
    Browse the repository at this point in the history

  4. cvode.version() got lost in a merge

    @nrnhines
    nrnhines committed Oct 3, 2024
    Configuration menu
    Copy the full SHA
    d7c2d10 View commit details
    Browse the repository at this point in the history

Commits on Oct 4, 2024

  1. test_kschan data for cvode 3.2.1

    @nrnhines
    nrnhines committed Oct 4, 2024
    Configuration menu
    Copy the full SHA
    fe1260f View commit details
    Browse the repository at this point in the history

  2. test_nrntest_fast.py tolerance adjustment for t14

    @nrnhines
    nrnhines committed Oct 4, 2024
    Configuration menu
    Copy the full SHA
    cf0ccb1 View commit details
    Browse the repository at this point in the history

  3. missing json file for ctest -R parallel::nrntest_fast

    @nrnhines
    nrnhines committed Oct 4, 2024
    Configuration menu
    Copy the full SHA
    f26fc9d View commit details
    Browse the repository at this point in the history

  4. cv3 version of json file for test_netcvode.py

    @nrnhines
    nrnhines committed Oct 4, 2024
    Configuration menu
    Copy the full SHA
    8368752 View commit details
    Browse the repository at this point in the history

  5. Merge branch 'master' into slds

    @nrnhines
    nrnhines authored Oct 4, 2024
    Configuration menu
    Copy the full SHA
    ca98ce5 View commit details
    Browse the repository at this point in the history

  6. temporarily turn off CI tests of rxd

    @nrnhines
    nrnhines committed Oct 4, 2024
    Configuration menu
    Copy the full SHA
    eb5e85a View commit details
    Browse the repository at this point in the history

Commits on Oct 6, 2024

  1. temporarily turn off (most) wheel builds and gitlab CI

    @nrnhines
    nrnhines committed Oct 6, 2024
    Configuration menu
    Copy the full SHA
    0d4cc21 View commit details
    Browse the repository at this point in the history

  2. adust a few tolerance values to see if more CI pass

    @nrnhines
    nrnhines committed Oct 6, 2024
    Configuration menu
    Copy the full SHA
    21c7826 View commit details
    Browse the repository at this point in the history

Commits on Oct 7, 2024

  1. Merge branch 'digest-debug-2' into digest-debug-3

    @nrnhines
    nrnhines committed Oct 7, 2024
    Configuration menu
    Copy the full SHA
    95b5cca View commit details
    Browse the repository at this point in the history

Commits on Oct 8, 2024

  1. nrn_digest(i) will print the details of the i'th digest item.

    @nrnhines
    nrnhines committed Oct 8, 2024
    Configuration menu
    Copy the full SHA
    52cd8b8 View commit details
    Browse the repository at this point in the history

Commits on Oct 9, 2024

  1. missing include

    @nrnhines
    nrnhines committed Oct 9, 2024
    Configuration menu
    Copy the full SHA
    97b1089 View commit details
    Browse the repository at this point in the history

Commits on Oct 15, 2024

  1. Allow digest when multiple threads.

    @nrnhines
    nrnhines committed Oct 15, 2024
    Configuration menu
    Copy the full SHA
    3277919 View commit details
    Browse the repository at this point in the history

  2. digest print solvex enter y

    @nrnhines
    nrnhines committed Oct 15, 2024
    Configuration menu
    Copy the full SHA
    02c9d51 View commit details
    Browse the repository at this point in the history

Commits on Oct 17, 2024

  1. sundial RPowerR uses hoc_pow. nrn_digest(i, "abort") calls abort() on 

    reaching index i
    @nrnhines
    nrnhines committed Oct 17, 2024
    Configuration menu
    Copy the full SHA
    8b4d2c2 View commit details
    Browse the repository at this point in the history

Commits on Oct 18, 2024

  1. Documentation for nrn_digest and use_exp_pow_precision

    @nrnhines
    nrnhines committed Oct 18, 2024
    Configuration menu
    Copy the full SHA
    a66cc8f View commit details
    Browse the repository at this point in the history

  2. nrn_digest signature consistent with documentation

    @nrnhines
    nrnhines committed Oct 18, 2024
    Configuration menu
    Copy the full SHA
    6910d0a View commit details
    Browse the repository at this point in the history

  3. occvode.cpp -Wall free

    @nrnhines
    nrnhines committed Oct 18, 2024
    Configuration menu
    Copy the full SHA
    932bdff View commit details
    Browse the repository at this point in the history

  4. Merge branch 'master' into hines/digest-debug-3

    @nrnhines
    nrnhines authored Oct 18, 2024
    Configuration menu
    Copy the full SHA
    a8e8b85 View commit details
    Browse the repository at this point in the history

  5. Merge branch 'master' into hines/digest-debug-3

    @nrnhines
    nrnhines authored Oct 18, 2024
    Configuration menu
    Copy the full SHA
    50b1163 View commit details
    Browse the repository at this point in the history

  6. The configure option is NRN_ENABLE_ARCH_INDEP_EXP_POW

    @nrnhines
    nrnhines committed Oct 18, 2024
    Configuration menu
    Copy the full SHA
    73c8c79 View commit details
    Browse the repository at this point in the history

  7. format

    @nrnhines
    nrnhines committed Oct 18, 2024
    Configuration menu
    Copy the full SHA
    71a629c View commit details
    Browse the repository at this point in the history

  8. Revert "adust a few tolerance values to see if more CI pass" 

    This reverts commit 21c7826.
    @nrnhines
    nrnhines committed Oct 18, 2024
    Configuration menu
    Copy the full SHA
    4d4889e View commit details
    Browse the repository at this point in the history

  9. Revert "temporarily turn off (most) wheel builds and gitlab CI" 

    This reverts commit 0d4cc21.
    @nrnhines
    nrnhines committed Oct 18, 2024
    Configuration menu
    Copy the full SHA
    befbb64 View commit details
    Browse the repository at this point in the history

  10. Revert "temporarily turn off CI tests of rxd" 

    This reverts commit eb5e85a.
    @nrnhines
    nrnhines committed Oct 18, 2024
    Configuration menu
    Copy the full SHA
    083a1c8 View commit details
    Browse the repository at this point in the history

  11. Merge branch 'master' into slds

    @nrnhines
    nrnhines authored Oct 18, 2024
    Configuration menu
    Copy the full SHA
    4c5905b View commit details
    Browse the repository at this point in the history

  12. Merge branch 'hines/digest-debug-3' into hines/cv3-digest

    @nrnhines
    nrnhines committed Oct 18, 2024
    Configuration menu
    Copy the full SHA
    ce227b4 View commit details
    Browse the repository at this point in the history

Commits on Oct 19, 2024

  1. Use the neuronsimulator fork of sundials

    @nrnhines
    nrnhines committed Oct 19, 2024
    Configuration menu
    Copy the full SHA
    e6017d3 View commit details
    Browse the repository at this point in the history

  2. passes ctest -j 8 (with "-ffp-model=strict")

    @nrnhines
    nrnhines committed Oct 19, 2024
    Configuration menu
    Copy the full SHA
    4267638 View commit details
    Browse the repository at this point in the history

Commits on Oct 21, 2024

  1. Merge branch 'master' into hines/cv3-digest

    @nrnhines
    nrnhines committed Oct 21, 2024
    Configuration menu
    Copy the full SHA
    befec84 View commit details
    Browse the repository at this point in the history

Commits on Oct 22, 2024

  1. Merge branch 'master' into hines/cv3-digest

    @nrnhines
    nrnhines committed Oct 22, 2024
    Configuration menu
    Copy the full SHA
    8099fd1 View commit details
    Browse the repository at this point in the history

  2. Update test/rxd/testdata for cvode3

    @nrnhines
    nrnhines committed Oct 22, 2024
    Configuration menu
    Copy the full SHA
    7c670b7 View commit details
    Browse the repository at this point in the history

  3. document how to update rxd test data

    @nrnhines
    nrnhines committed Oct 22, 2024
    Configuration menu
    Copy the full SHA
    e0a6bc2 View commit details
    Browse the repository at this point in the history

Commits on Oct 23, 2024

  1. Revert "Update test/rxd/testdata for cvode3" 

    This reverts commit 7c670b7.
    @nrnhines
    nrnhines committed Oct 23, 2024
    Configuration menu
    Copy the full SHA
    8ab1989 View commit details
    Browse the repository at this point in the history

  2. fix typo

    @nrnhines
    nrnhines committed Oct 23, 2024
    Configuration menu
    Copy the full SHA
    5bdaf5e View commit details
    Browse the repository at this point in the history

  3. update rxdtest repository (e0a6bc2) 2024-10-22

    @nrnhines
    nrnhines committed Oct 23, 2024
    Configuration menu
    Copy the full SHA
    9870f3f View commit details
    Browse the repository at this point in the history

Commits on Oct 24, 2024

  1. Merge branch 'master' into hines/cv3

    @nrnhines
    nrnhines committed Oct 24, 2024
    Configuration menu
    Copy the full SHA
    f0d233a View commit details
    Browse the repository at this point in the history

  2. cd share/lib/python/neuron/tests; python test_rxd.py --save test_rxd.… 

    …json
    @nrnhines
    nrnhines committed Oct 24, 2024
    Configuration menu
    Copy the full SHA
    710c2c2 View commit details
    Browse the repository at this point in the history

  3. extend the rxd test data instructions

    @nrnhines
    nrnhines committed Oct 24, 2024
    Configuration menu
    Copy the full SHA
    45e0fc9 View commit details
    Browse the repository at this point in the history

Commits on Oct 25, 2024

  1. propagate compiler from nrn to sundials. SUNDIALS MPI_ENABLE=OFF

    @nrnhines
    nrnhines committed Oct 25, 2024
    Configuration menu
    Copy the full SHA
    9db5f29 View commit details
    Browse the repository at this point in the history

  2. Merge branch 'master' into hines/cv3

    @nrnhines
    nrnhines committed Oct 25, 2024
    Configuration menu
    Copy the full SHA
    5de9b21 View commit details
    Browse the repository at this point in the history

  3. Since sundials MPI_ENABLE=OFF have our own nvector_parallel.h

    @nrnhines
    nrnhines committed Oct 25, 2024
    Configuration menu
    Copy the full SHA
    4464390 View commit details
    Browse the repository at this point in the history

Commits on Oct 26, 2024

  1. nvector_parallel.cpp agnostic with respect to MPI_Comm

    @nrnhines
    nrnhines committed Oct 26, 2024
    Configuration menu
    Copy the full SHA
    5614e5d View commit details
    Browse the repository at this point in the history

Commits on Oct 28, 2024

  1. cast between sunindextype and long

    @nrnhines
    nrnhines committed Oct 28, 2024
    Configuration menu
    Copy the full SHA
    285dada View commit details
    Browse the repository at this point in the history

  2. update a cv3.json file.

    @nrnhines
    nrnhines committed Oct 28, 2024
    Configuration menu
    Copy the full SHA
    f17e9a8 View commit details
    Browse the repository at this point in the history

  3. nrnparallel_ld follows nvector_parallel style for MPI_Comm

    @nrnhines
    nrnhines committed Oct 28, 2024
    Configuration menu
    Copy the full SHA
    ac12c82 View commit details
    Browse the repository at this point in the history

  4. relax resolution requirements so macosx will pass CI without needing 

    -DNRN_ENABLE_ARCH_INDEP_EXP_POW=ON
-DCMAKE_C_FLAGS="-ffp-model=strict" -DCMAKE_CXX_FLAGS="-ffp-model=strict"
    @nrnhines
    nrnhines committed Oct 28, 2024
    Configuration menu
    Copy the full SHA
    34b82a7 View commit details
    Browse the repository at this point in the history

  5. adjust tol of test_nrntest_fast.py::test_t14[cvode_long_double-3-t] 

      needed for 4 ubuntu CI. Not sure about the underlying cause.
    @nrnhines
    nrnhines committed Oct 28, 2024
    Configuration menu
    Copy the full SHA
    4e12ea1 View commit details
    Browse the repository at this point in the history

  6. black format for test/.../*.py

    @nrnhines
    nrnhines committed Oct 28, 2024
    Configuration menu
    Copy the full SHA
    b398627 View commit details
    Browse the repository at this point in the history

Commits on Oct 31, 2024

  1. Changes after ctest coverage analysis.

    @nrnhines
    nrnhines committed Oct 31, 2024
    Configuration menu
    Copy the full SHA
    68bc030 View commit details
    Browse the repository at this point in the history

  2. Merge branch 'master' into slds

    @nrnhines
    nrnhines authored Oct 31, 2024
    Configuration menu
    Copy the full SHA
    1c2308c View commit details
    Browse the repository at this point in the history

Commits on Nov 1, 2024

  1. Merge branch 'master' into hines/cv3

    @nrnhines
    nrnhines committed Nov 1, 2024
    Configuration menu
    Copy the full SHA
    c084919 View commit details
    Browse the repository at this point in the history

  2. Replace cvode.extra_scatter_gather with h.beforestep_callback

    @nrnhines
    nrnhines committed Nov 1, 2024
    Configuration menu
    Copy the full SHA
    f96ebe3 View commit details
    Browse the repository at this point in the history

  3. use rxdtestdata hines/cvode3 721ac55a

    @nrnhines
    nrnhines committed Nov 1, 2024
    Configuration menu
    Copy the full SHA
    a5f2b48 View commit details
    Browse the repository at this point in the history

Commits on Nov 2, 2024

  1. Don't use cvode version specific filenames or keys for json data.

    @nrnhines
    nrnhines committed Nov 2, 2024
    Configuration menu
    Copy the full SHA
    7286d43 View commit details
    Browse the repository at this point in the history