mpa139 · CherBass · Aug 28, 2021 · Aug 28, 2021 · Aug 28, 2021 · Aug 28, 2021
diff --git a/CNAME b/CNAME
diff --git a/README.md b/README.md
@@ -1,11 +1,12 @@
-# Allan Lab Website
+# METRICS Lab Website
 
-This is the website of our academic research group at Leiden University.
+This is the website of our academic research group at King's College London.
 
 This website is powered by Jekyll and some Bootstrap, Bootwatch. We tried to make it simple yet adaptable, so that it is easy for you to use it as a template. Plese feel free to copy and modify for your own purposes.  You don't have to link to us or mention us (but of course we appreciate it).
 
 Go to *aboutwebsite.md*  to learn how to copy and modidy this page for your purpose. 
 
 
 Copyright Allan Lab. Code released under the MIT License.
+See original website at http://www.allanlab.org/aboutwebsite.html
 
diff --git a/_config.yml b/_config.yml
@@ -6,14 +6,13 @@
 # 'jekyll serve'. If you change this file, please restart the server process.
 
 # Site settings
-title: The Allan Lab
-email: [email protected]
+title: The METRICS Lab
+email:
 description: > # this means to ignore newlines until "baseurl:"
-  Write an awesome description for your new site here. You can edit this
-  line in _config.yml. It will appear in your document head meta (for
-  Google search results) and in your feed.xml site description.
+  This is group website for METRICS - Machine Learning for Translational Imaging in Development and Cognition, King's College London
 baseurl: ""
-url: ""
+url: "https://metrics-lab.github.io"
+keywords: "METRICS, King's College, Deep learning, MRI, brain, Human Connectome Project, Developing Human Connetome Project"
 
 include:
   - .htaccess

diff --git a/_data/alumni_bsc.yml b/_data/alumni_bsc.yml
@@ -1,15 +1,3 @@
-- name: Vishnu Saj, Spring 2017
-
-- name: Arjo Andringa, Spring 2016
-
-- name: Joey Braspenning, Spring 2017
-
-- name: Tjerk Benschop, Summer 2017
-
-- name: Margot Leemker, Spring 2017
-
-- name: Sietske Lensen, Spring 2017
-
-- name: Daniëlle van Klink, Spring 2016
-
-- name: Amber Vervloet, Spring 2019
+- name: Shaheim Ogbomo-Harmitt (2020)
+- name: Asmin Alam (2021)
+- name: Weiwei Qian (2021)
diff --git a/_data/alumni_members.yml b/_data/alumni_members.yml
@@ -1,31 +1,17 @@
-- name: Gijsbert Verdoes
-  photo: verdoes.jpg
-  duration: In the Allan Lab 2015 - 2018, now Project manager at the FMD
-  info: Fine mechanical engineer associated with the FMD working in our group
-  email: [email protected]
-  number_educ: 1
-  education1: Leidse instrumentmakers School
-  education2:
-  education3:
+- name: Dr. Cher Bass
+  photo: cherbass.jpg
+  info: Research Associate
+  email: cher.bass(at)kcl.ac.uk
+  number_educ: 2
+  education1: PhD in Neurotechnology 
+  education2: Predicting biomarkers of cognitive function from brain magnetic resonance imaging data
+  education3: 
   education4:
 
-- name: Irene Battisti
-  photo: irene.jpg
-  info: PhD student
-  duration: In the Allan Lab Jan 2015 to June 2019, now R&D scientist at Nearfield Instruments
-  email: [email protected]
-  number_educ: 3
-  education1: Master Padova University
-  education2: Master thesis at Leiden University with <a href="https://www.physics.leidenuniv.nl/vanruitenbeek">Jan van Ruitenbeek</a>
-  education3: PhD Leiden University!
-
-- name: Doohee Cho
-  photo: Doohee2.jpg
-  info: Postdoc
-  duration: In the Allan Lab May 2017 to June 2019, now assistant professor at Yonsei University
-  email: [email protected]
-  number_educ: 4
-  education1: B.S. Yonsei University, Korea
-  education2: PhD Yonsei University, Korea with <a href="http://web.yonsei.ac.kr/nano/%ED%95%99%EA%B3%BC%EC%86%8C%EA%B0%9C.htm">In-Whan Lyo</a>
-  education3: Postdoc POSTECH with <a href="http://caldes.ibs.re.kr/html/caldes_en/">Han Woong Yeom</a>
-  education4: Postdoc Rutgers with <a href="http://rcem.rutgers.edu/">Sang-Wook Cheong</a>
+- name: Dr. Alena Uus
+  photo: alena.png
+  info: Research Associate
+  email: alena.uus(at)kcl.ac.uk
+  number_educ: 2
+  education1: PhD in Information Engineering
+  education2: Motion compensation and blood flow reconstruction for fetal MRI and registration for neonatal diffusion MRI
diff --git a/_data/alumni_msc.yml b/_data/alumni_msc.yml
@@ -1,17 +1,3 @@
-- name: Maarten Leeuwenhoek, Spring 2015
-
-- name: Koen M Bastiaans, Spring 2015
-
-- name: Farshaad Hoeseni, Fall 2015
-
-- name: Oliver Ostojic, Spring 2016
-
-- name: Tjerk Benschop, Spring 2016
-
-- name: Bert Visscher, Fall 2017
-
-- name: Ahmad Jamalzada, Fall 2017
-
-- name: Corne Koks, Fall 2018
-
-- name: Damian Bouwmeester, Summer 2019
+- name: Ezequiel Ortiz (2020)
+- name: Alison Leahy (2021)
+- name: Georgina Petropoulou (2021)
diff --git a/_data/alumni_visitors.yml b/_data/alumni_visitors.yml
@@ -1,11 +1 @@
-- name: Nikolaos Iliopoulos, Spring 2016
-
-- name: Vitaly Fedoseev, all of 2016
-
-- name: Alexander Vanstone, Spring 2016
-
-- name: Ramakrishna Aluru, Summer 2018
-
-- name: Changwei Zou, Spring 2018
-
-- name: Kemal Demir, Summer 2019
+# - name: 
diff --git a/_data/news.yml b/_data/news.yml
@@ -1,126 +1,36 @@
-- date: 5. September 2019
-  headline: "The noise doubling paper is published in <a href='https://journals.aps.org/prb/abstract/10.1103/PhysRevB.100.104506'>Phys. Rev. B</a>!"
-
-
-- date: 25. August 2019
-  headline: "<b>Doohee got an assistant professor job at Yonsei University!</b>"
-
-- date: 25. July 2019
-  headline: "<b>The inhomogeneous superfluid paper is published in <a href='https://www.nature.com/articles/s41586-019-1408-8'>Nature</a>!</b><img src='/images/newspic/SFnews.png' class='img-responsive' style='max-width: 192px' />"
-
-- date: 15. July 2019
-  headline: "We imaged the doubling of shot noise due to Andreev reflections in a STM, posted <a href='https://arxiv.org/abs/1907.05808'> on arXiv</a>."
-
-- date: 24. May 2019
-  headline: "The smart tip paper <a href='https://iopscience.iop.org/article/10.1088/1361-6528/ab1c7f/pdf'> is finally published !</a> A collaboration with the <a href='http://groeblacherlab.tudelft.nl/'>Gröblacher Lab</a> at TU Delft.<img src='/images/newspic/SmartTip.png' class='img-responsive' style='max-width: 192px' />"
-
-- date: 08. May 2019
-  headline: "<b>Irene defends her PhD!</b>"
-
-- date: 08. May 2019
-  headline: "Dome makes it on the <a href='https://www.universiteitleiden.nl/nieuws/2019/05/de-meest-stabiele-microscoop-ter-wereld'>University website</a>. <img src='/images/newspic/Saphireheadline.jpeg' class='img-responsive' style='max-width: 192px' />"
-
-- date: 13. December 2018
-  headline: "Our paper about how to construct an STM is in <a href='https://aip.scitation.org/doi/10.1063/1.5064442'>Review of Scientific Instruments</a>. <img src='/images/newspic/DomeNews.png' class='img-responsive' style='max-width: 192px' />"
-
-- date: 08. October 2018
-  headline: "We discovered charge trapping in a high-Tc superconductor! Publication in <a href='https://www.nature.com/articles/s41567-018-0300-z'>Nature Physics</a>. <img src='/images/pubpic/Pub_BCl.png' class='img-responsive' style='max-width: 192px' />"
-
-- date: 27. September 2018
-  headline: "Our MHz amplifier for STM is published in <a href='https://aip.scitation.org/doi/10.1063/1.5043267'>Review of Scientific Instruments</a>. <img src='/images/newspic/amp.PNG' class='img-responsive' style='max-width: 192px' />"
-
-- date: 16. May 2018
-  headline: "Milan, Koen and Irene talk about superconductivity in <a href='https://youtu.be/hxz22AYUGhM'>Made in Leiden</a>."
-
-- date: 4. May 2018
-  headline: "Welcome Ram!"
-
-- date: 5.-9. March 2018
-  headline: "Irene and Milan are at the March Meeting (Talk <a href='http://meetings.aps.org/Meeting/MAR18/Session/E45.11'>Tue 10am, session E45</a>)"
-
-- date: 13. November 2017
-  headline: "<a href='http://www.beilstein-journals.org/bjnano/content/pdf/2190-4286-8-238.pdf'> New paper</a> published in collaboration with the group of Jan van Ruitenbeek"
-
-- date: 10. November 2017
-  headline: "Doohee makes the third place at the <a href='https://www.universiteitleiden.nl/en/news/2017/11/sander-blok-wins-lion-image-award-2017'>LION Image Award</a>. <img src='/images/newspic/doohee_prize.png' class='img-responsive' style='max-width: 192px' />"
-
-- date: 9. October 2017
-  headline: "We contributed to Miguel and Jan's  <a href='https://journals.aps.org/prb/abstract/10.1103/PhysRevB.96.134507'>new paper</a>.  "
-
-- date: 12. August 2017
-  headline: "<a href='https://www.universiteitleiden.nl/en/news/2017/08/two-erc-grants-for-leiden-physics'>We got an ERC starting grant</a>."
-
-- date: 10. August 2017
-  headline: "Our paper is published in <a href='https://scipost.org/SciPostPhys.3.2.010/pdf'>SciPost Physics</a>."
-
-- date: 17. - 21. July 2017
-  headline: "<a href='https://www.universiteitleiden.nl/en/news/2017/07/milan-allan-wins-bryan-r.-coles-prize'>Milan wins the Bryan R. Coles prize</a> at SCES 2017, Prague. Koen received the best poster presentation award.  <img src='/images/newspic/scesprizes.jpg' class='img-responsive' style='max-width: 192px' />"
-
-- date: 17. - 21. July 2017
-  headline: "Koen, Maarten and Milan will be at SCES 2017, Prague. Come check out our posters on Tuesday&Thursday and talk on Thursday!"
-
-- date: 18. June 2017
-  headline: "<b>Paper on poor electronic screening published in  <a href='https://journals.aps.org/prb/abstract/10.1103/PhysRevB.95.235141'>  PRB</a> as Editors' selection! </b>"
-
-- date: 15. May 2017
-  headline: Welcome Doohee!
-
-- date: 13. - 17. March 2017
-  headline: Koen & Irene give talks at the APS March Meeting in New Orleans.
-
-- date: 27. January - 3. March 2017
-  headline: "We are looking forward to co-hosting <a href='http://www.lorentzcenter.nl/lc/web/2017/877/info.php3?wsid=877&venue=Oort'>the workshop on unconventional superconductivity</a> at the Lorentz center. <img src='/images/newspic/LCposter.jpg' class='img-responsive' style='max-width: 192px' />"
-
-- date: 17-18. January 2017
-  headline: Irene, Koen, Maarten and Milan will be at Physics@Veldhoven 2017. (Talk at PT6.1 and poster at P9.022).
-
-- date: 25. November 2016
-  headline: "We are part of a newly granted <a href='https://www.fom.nl/en/research/research-programmes/general-information//'>Vrije Programma</a> on strange metals, together with the groups of <b> Hussey, Golden, vHeumen, Zaanen, Schalm, Stoof and Vandoren</b>, see <a href='https://www.fom.nl/en/news/press-releases/2016/11/21/fom-awards-15-1-million-euros-to-highly-promising-research/'>press release</a>. We also got a <a href='https://www.fom.nl/en/news/press-releases/2016/11/18/28634/'>Projectruimte</a>."
-
-- date: 19. September 2016
-  headline: "<b> Our first paper from Leiden is <a href='http://www.nature.com/nphys/journal/vaop/ncurrent/full/nphys3894.html'>online at Nature Physics</a>! </b><img src='/images/newspic/NewsNP.png' class='img-responsive' style='max-width: 192px' /> "
-
-- date: 12. September 2016
-  headline: Koen is at Correl16, Julich.
-
-- date: 01. July 2016
-  headline: Milan is at the strongly correlated electron GRC 2016.
-
-- date: 24. June 2016
-  headline: Felix Baumberger is visiting.
-
-- date: 17. June 2016
-  headline: Irene is at SNS2016.
-
-- date: 28. April 2016
-  headline: <b> Our results on the Mott & pseudo gap physics posted on <a href='http://arxiv.org/abs/1604.08343'>arXiv</a> ! </b>
-
-- date: 14. May 2016
-  headline: Ivan Bozovic is visiting.
-
-- date: 17. March 2016
-  headline: Koen, Irene & Vitaly present a poster at Sun Sailing Science.
-
-- date: 17. Jan 2016
-  headline: "We discover electronic order and pseudogap in a non-cuprate materal! <img src='/images/newspic/order.png' class='img-responsive' style='max-width: 192px' />"
-
-- date: 01. Jan 2016
-  headline: Welcome Vitaly!
-
-- date: 17. June 2015
-  headline: Welcome Kees!
-
-- date: 17. June 2015
-  headline: "Maarten wins the LION image award! Check out his <a href='https://www.physics.leidenuniv.nl/index.php?id=11573&news=757&type=lion&ln=EN'>submission</a>.<img src='/images/newspic/Contest.jpg' class='img-responsive' style='max-width:192px' />"
-
-- date: 17. June 2015
-  headline: "<b> We win a Vidi grant: 800kEUR to invest in science! (<a href='http://www.news.leiden.edu/news-2015/5-vidis-for-leiden-reserachers.html'>Leiden news</a>, <a href='http://www.fom.nl/live/english/news/archives/pressreleases2015/artikel.pag?objectnumber=297954'>FOM news item</a>) </b>"
-
-- date: 01. Sept 2015
-  headline: "Welcome Koen and Maarten: from Master- to PhD-students"
-
-- date: 17. June 2015
-  headline: "We got our commercial STM from <a href='http://www.unisoku.com/'>Unisoku</a>, and we are already busy modifying."
-
-- date: 01. Jan 2015
-  headline: Welcome Irene, Gijsbert & Milan — <b> our lab is officially starting</b>!
+- date: 04 Mar 2022
+  headline: <b>Congratulations</b> to Simon Dahan for his MIDL acceptance! Paper on OpenReview <a href="https://openreview.net/pdf?id=mpp843Bsf-">here</a>.
+- date: 22 Oct 2021
+  headline: <b>New post!</b> <a href="https://www.jobs.ac.uk/job/CKC160/research-associate-or-research-software-engineer-in-image-registration-and-machine-learning-for-clinical-translation-of-neuroimaging">Research associate OR research software engineer in image registration and machine learning for clinical translation of neuroimaging </a> 
+- date: 22 Oct 2021
+  headline: <b>New preprint out!</b> <a href="https://www.biorxiv.org/content/10.1101/2021.10.13.464206v1.abstract"> Structural and functional asymmetry of the neonatal cerebral cortex </a> by Logan Williams
+- date: 15 Oct 2021
+  headline: <b>Congratulations</b> to Paula Ramirez-Gilliland for her award for most outstanding individual project in her MRes Healthcare Technologies cohort!
+- date: 13 Oct 2021
+  headline: A <b>massive</b> congratulations to Simon Dahan for achieving the top overall mark in his MRes Healthcare Technologies cohort!
+- date: 27 Aug 2021
+  headline: <b>Welcome</b> to our new PhD students Diego Fajardo, Yourong Guo and Zhenshan Xie!
+- date: 23 Aug 2021
+  headline: <b>Congratulations</b> to Mariana da Silva for being accepted for an oral presentation at MLCN
+- date: 23 Aug 2021
+  headline: <b>Congratulations</b> to Paula Ramirez Gilliland and Simon Dahan for completing their MRes theses!
+- date: 28. Jul 2021
+  headline: Three papers from the MeTrICS lab for presentation at the <a href="https://mlcnws.com/2021/08/11/mlcn-2021-accepted-papers/">MLCN workshop</a>. 
+- date: 23 Jun 2021
+  headline: <b>Congratulations</b> to Logan Williams for first place in the PGR Symposium 3-minute thesis presentation
+- date: 30. May 2021
+  headline: <b>Congratulations</b> to Logan Williams for his poster presentation at OHBM
+- date: 12 Apr 2021
+  headline: <b>Welcome</b> to our new post-doc, Mohamed Suliman!
+- date: 30. Oct 2020
+  headline:  <b>Congratulations</b> to Mariana da Silva for her Medical Imaging Meets NeurIPS acceptance
+- date: 22. Oct 2020
+  headline: <b>New PhD project available.</b> See our vacancies
+- date: 21. Oct 2020
+  headline: <b>Welcome</b> to our new rotation student, Lauren Strickland
+- date: 12. Oct 2020
+  headline: <b>Blog series</b> on interpretable deep learning 
+- date: 01. Oct 2020
+  headline: <b>Welcome</b> to our new students Simon Dahan, Paula Ramirez Gilliland and Helena Sousa
+- date: 26. Sept 2020
+  headline: <b>Congratulations</b> to Cher Bass for her NeurIPS acceptance!