Add ICD11 mappings back

[hrshdhgd]

Follow-up to : #135.

As per this PR we are DELETEing the prefix ICD11: as a dbxref. We need to add it back when needed.

[joeflack4]

Hey @hrshdhgd , do you think there is still some work needed? This isn't related to #16 is it? Is this just about adding an ICD11 dbxref to a SPARQL query?

[matentzn]

This is related to

https://github.com/monarch-initiative/mondo-ingest/blob/main/src/sparql/rm_xref_by_prefix.ru#L19

where we exclude ICD11 mappings from DOID (and other sources), once we have an active alignment process with ICD11, we should add this back.

[joeflack4]

@hrshdhgd Just FYI, #434 will be merged soon. I suppose whenever you have time, you can handle this, maybe after the merge?

New ICD11Foundation prefixes
Or maybe you can tackle it whenever, as it looks to me like all of the new ICD11Foundation prefixes are already in all of the right places in develop. icd11.foundation has been added, along with 2 others. icd11.foundation is the one you need to be primarily concerned with, as it is on all the classes. There's also icd11.z, but IIRC this is just for retired classes, and there aren't many. The 3rd one is icd11.schema.

Old ICD11 prefix
I don't know if we plan on removing ICD11, but in my opinion @hrshdhgd @twhetzel @hrshdhgd, we may want to rename it. For example, all of the instances of ICD-11 in Orphanet are references to ICD11MMS (Morbidity and Mortality Statistics), so I suggest we rename ICD11 to ICD11MMS if Orphanet comprises 100% of such references, or if the other references also refer to ICD11MMS.

[hrshdhgd]

#486 takes care of this @joeflack4 . I'm not aware of any prefix changes and I'll be out after April 15th for a while. If there is any concensus on this please feel free to edit the PR and merge is as you see fir @joeflack4 .

[joeflack4]

@hrshdhgd Thanks ill take a look!