Merge pull request #18 from molgenis/feat/gado

Split GADO into two fields
molgenis · Jul 4, 2023 · 3303e23 · 3303e23
2 parents ac708df + 32045a5
commit 3303e23
Show file tree

Hide file tree

Showing 2 changed files with 16 additions and 5 deletions.
diff --git a/pom.xml b/pom.xml
@@ -13,7 +13,7 @@
 
   <groupId>org.molgenis</groupId>
   <artifactId>vip-utils</artifactId>
-  <version>1.4.0</version>
+  <version>1.3.0</version>
 
   <name>vip-utils</name>
   <description>Shared classes and tools between VIP repo's</description>

diff --git a/src/main/resources/field_metadata.json b/src/main/resources/field_metadata.json
@@ -139,9 +139,20 @@
           "separator": "&",
           "type": "STRING"
         },
-        "GADO": {
-          "label": "GADO",
-          "description": "The combined prioritization GADO Z-score over the supplied HPO terms for this case.",
+        "GADO_PD": {
+          "label": "GADO_PD",
+          "description": "The GADO prediction for the relation between the HPO terms of the proband(s) and the gene, HC: high confidence, LC: low confidence.",
+          "numberType": "NUMBER",
+          "numberCount": 1,
+          "type": "CATEGORICAL",
+          "categories": [
+            "LC",
+            "HC"
+          ]
+        },
+        "GADO_SC": {
+          "label": "GADO_SC",
+          "description": "The combined prioritization GADO Z-score over the HPO of the proband(s) terms for this case.",
           "numberType": "NUMBER",
           "numberCount": 1,
           "type": "FLOAT"
@@ -361,4 +372,4 @@
       }
     }
   }
-}
+}