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Change default linesearch to Hager-Zhang (#172)
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* Switch to Hager-Zhang linesearch

* Update docstring about linesearch

* Increase tolerance of checks

* Select different number of default iterations

* Deepcopy optimizer if using multi-threading

* Increment minor version number

* Bump Pathfinder compat entries in integration tests

* Bump Pathfinder version for docs

* Ensure size of iterator is known without evaluating
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sethaxen authored Dec 5, 2023
1 parent 67b90cf commit 2f8e8df
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Showing 9 changed files with 35 additions and 26 deletions.
2 changes: 1 addition & 1 deletion Project.toml
Original file line number Diff line number Diff line change
@@ -1,7 +1,7 @@
name = "Pathfinder"
uuid = "b1d3bc72-d0e7-4279-b92f-7fa5d6d2d454"
authors = ["Seth Axen <[email protected]> and contributors"]
version = "0.7.11"
version = "0.8.0"

[deps]
Distributions = "31c24e10-a181-5473-b8eb-7969acd0382f"
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2 changes: 1 addition & 1 deletion docs/Project.toml
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Expand Up @@ -21,7 +21,7 @@ DynamicHMC = "3"
ForwardDiff = "0.10"
LogDensityProblems = "1, 2"
LogDensityProblemsAD = "1, 2"
Pathfinder = "0.7"
Pathfinder = "0.8"
StatsFuns = "0.9, 1"
StatsPlots = "0.14, 0.15"
TransformVariables = "0.6, 0.7, 0.8"
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11 changes: 7 additions & 4 deletions src/Pathfinder.jl
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Expand Up @@ -24,14 +24,17 @@ using UnPack: @unpack
export PathfinderResult, MultiPathfinderResult
export pathfinder, multipathfinder

# Note: we override the default history length to be shorter and the default line search
# to be More-Thuente, which keeps the approximate inverse Hessian positive-definite
const DEFAULT_HISTORY_LENGTH = 6
const DEFAULT_LINE_SEARCH = LineSearches.MoreThuente()
const DEFAULT_LINE_SEARCH = LineSearches.HagerZhang()
const DEFAULT_LINE_SEARCH_INIT = LineSearches.InitialHagerZhang()
const DEFAULT_NDRAWS_ELBO = 5

function default_optimizer(history_length)
return Optim.LBFGS(; m=history_length, linesearch=DEFAULT_LINE_SEARCH)
return Optim.LBFGS(;
m=history_length,
linesearch=DEFAULT_LINE_SEARCH,
alphaguess=DEFAULT_LINE_SEARCH_INIT,
)
end

include("transducers.jl")
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21 changes: 12 additions & 9 deletions src/multipath.jl
Original file line number Diff line number Diff line change
Expand Up @@ -162,26 +162,29 @@ function multipathfinder(
logp(x) = -optim_fun.f(x, nothing)

# run pathfinder independently from each starting point
trans = Transducers.Map() do (init_i)
trans = Transducers.Map() do (init_i, optimizer_i)
return pathfinder(
optim_fun;
rng,
history_length,
optimizer,
optimizer=optimizer_i,
ndraws=ndraws_per_run,
init=init_i,
executor=executor_per_run,
ndraws_elbo,
kwargs...,
)
end
iter_sp = if executor isa Folds.ThreadedEx
# temporary workaround due to
# https://github.com/JuliaFolds2/Transducers.jl/issues/10
_init
else
Transducers.withprogress(_init; interval=1e-3)
end |> trans
iter_optimizers = fill(optimizer, nruns)
iter_sp =
if executor isa Folds.ThreadedEx
# temporary workaround due to
# https://github.com/JuliaFolds2/Transducers.jl/issues/10
# also support optimizers that store state
zip(_init, Iterators.map(deepcopy, iter_optimizers))
else
Transducers.withprogress(zip(_init, iter_optimizers); interval=1e-3)
end |> trans
pathfinder_results = Folds.collect(iter_sp, executor)
fit_distributions =
pathfinder_results |> Transducers.Map(x -> x.fit_distribution) |> collect
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5 changes: 3 additions & 2 deletions src/singlepath.jl
Original file line number Diff line number Diff line change
Expand Up @@ -117,8 +117,9 @@ constructed using at most the previous `history_length` steps.
inverse Hessian.
- `optimizer`: Optimizer to be used for constructing trajectory. Can be any optimizer
compatible with Optimization.jl, so long as it supports callbacks. Defaults to
`Optim.LBFGS(; m=history_length, linesearch=LineSearches.MoreThuente())`. See
the [Optimization.jl documentation](https://optimization.sciml.ai/stable) for details.
`Optim.LBFGS(; m=history_length, linesearch=LineSearches.HagerZhang(), alphaguess=LineSearches.InitialHagerZhang())`.
See the [Optimization.jl documentation](https://optimization.sciml.ai/stable) for
details.
- `ntries::Int=1_000`: Number of times to try the optimization, restarting if it fails. Before
every restart, a new initial point is drawn using `init_sampler`.
- `fail_on_nonfinite::Bool=true`: If `true`, optimization fails if the log-density is a
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2 changes: 1 addition & 1 deletion test/integration/AdvancedHMC/Project.toml
Original file line number Diff line number Diff line change
Expand Up @@ -23,7 +23,7 @@ LogDensityProblems = "1, 2"
LogDensityProblemsAD = "1"
MCMCDiagnosticTools = "0.3"
Optim = "1.4"
Pathfinder = "0.7"
Pathfinder = "0.7, 0.8"
Statistics = "1"
StatsFuns = "0.9, 1"
TransformVariables = "0.6, 0.7, 0.8"
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2 changes: 1 addition & 1 deletion test/integration/DynamicHMC/Project.toml
Original file line number Diff line number Diff line change
Expand Up @@ -19,7 +19,7 @@ LogDensityProblems = "1, 2"
LogDensityProblemsAD = "1"
MCMCDiagnosticTools = "0.3"
Optim = "1.4"
Pathfinder = "0.7"
Pathfinder = "0.7, 0.8"
Statistics = "1"
StatsFuns = "0.9, 1"
TransformVariables = "0.6, 0.7, 0.8"
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2 changes: 1 addition & 1 deletion test/integration/Turing/Project.toml
Original file line number Diff line number Diff line change
Expand Up @@ -5,6 +5,6 @@ Test = "8dfed614-e22c-5e08-85e1-65c5234f0b40"
Turing = "fce5fe82-541a-59a6-adf8-730c64b5f9a0"

[compat]
Pathfinder = "0.5, 0.6, 0.7"
Pathfinder = "0.5, 0.6, 0.7, 0.8"
Turing = "0.24, 0.25, 0.26, 0.27, 0.28, 0.29"
julia = "1.6"
14 changes: 8 additions & 6 deletions test/singlepath.jl
Original file line number Diff line number Diff line change
Expand Up @@ -39,9 +39,9 @@ include("test_utils.jl")
Pathfinder.default_optimizer(Pathfinder.DEFAULT_HISTORY_LENGTH)
fit_distribution = result.fit_distribution
@test fit_distribution isa MvNormal
@test fit_distribution.μ zeros(dim)
@test fit_distribution.μ zeros(dim) atol = 1e-6
@test fit_distribution.Σ isa Pathfinder.WoodburyPDMat
@test fit_distribution.Σ I
@test fit_distribution.Σ I atol = 1e-6
@test size(fit_distribution.Σ.B) == (dim, 2) # history contains only 1 iteration
@test result.draws isa AbstractMatrix
@test size(result.draws) == (dim, ndraws)
Expand Down Expand Up @@ -97,7 +97,9 @@ include("test_utils.jl")
Random.seed!(rng, seed)
# less restrictive type check to work around https://github.com/mlcolab/Pathfinder.jl/issues/142
# TODO: remove this workaround once the issue is fixed
result = @inferred PathfinderResult pathfinder(ℓ; rng, optimizer, ndraws_elbo, executor)
result = @inferred PathfinderResult pathfinder(
ℓ; rng, optimizer, ndraws_elbo, executor
)
@test result.input ===
@test result.fit_distribution.Σ Σ rtol = 1e-1
@test result.optimizer == optimizer
Expand All @@ -113,12 +115,12 @@ include("test_utils.jl")
i = 0
callback = (args...,) -> (i += 1; false)
pathfinder(ℓ; callback)
@test i 6
@test i 4

Random.seed!(42)
i = 0
pathfinder(ℓ; callback, maxiters=5)
@test i == 6
pathfinder(ℓ; callback, maxiters=3)
@test i == 4
end
end
@testset "retries" begin
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Registration pull request created: JuliaRegistries/General/96535

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## Breaking changes

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