minumum changes to build PyMFEM with MFEM4.6 #90
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| name: Test_with_MFEM_release | |
| on: | |
| pull_request: | |
| types: | |
| - labeled | |
| #push: | |
| # branches: [ test ] | |
| #pull_request: | |
| # branches: [ test ] | |
| # types: [synchronize] | |
| jobs: | |
| build: | |
| if: contains(github.event.pull_request.labels.*.name, 'in-test-with-mfem-release') | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| python-version: ["3.7", "3.8", "3.9"] | |
| #python-version: ["3.10"] | |
| #os: [ubuntu-latest] | |
| os: [ubuntu-20.04] | |
| # USE_FLAGS : cuda, parallel, libceed | |
| env: | |
| - { USE_FLAGS: "000"} | |
| - { USE_FLAGS: "010"} | |
| include: | |
| - os: macos-latest | |
| python-version: 3.9 | |
| env: {USE_FLAGS: "000"} | |
| runs-on: ${{ matrix.os }} | |
| #env: ${{ matrix.env }} | |
| env: | |
| USE_FLAGS: ${{ matrix.env.USE_FLAGS }} | |
| CUDA: "11.5" | |
| SANDBOX: ~/sandbox | |
| steps: | |
| - uses: actions/checkout@v3 | |
| # with: | |
| # ref: master_tracking_branch | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v4 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Install dependencies | |
| run: | | |
| #python -m pip install --upgrade pip setuptools wheel | |
| python -c "import setuptools;print(setuptools.__version__)" | |
| PYTHONLIB=~/sandbox/lib/python${{ matrix.python-version }}/site-packages | |
| mkdir -p $PYTHONLIB | |
| export PYTHONPATH=$PYTHONLIB:$PYTHONPATH | |
| echo "PYTHONPATH:"$PYTHONPATH | |
| pip install six --verbose | |
| if [ "${{matrix.python-version}}" = "3.10" ] ; then | |
| pip install numba numba-scipy --verbose | |
| #pip install scipy | |
| else | |
| pip install numba numba-scipy --verbose | |
| fi | |
| if [ -f requirements.txt ]; then | |
| pip install -r requirements.txt --prefix=~/sandbox --verbose | |
| fi | |
| python -c "import sys;print(sys.path)" | |
| python -c "import numpy;print(numpy.__file__)" | |
| which swig # this default is 4.0.1 | |
| pip install swig --prefix=~/sandbox | |
| export PATH=/usr/local/cuda-${CUDA}/bin:~/sandbox/bin:$PATH | |
| which swig | |
| swig -version | |
| if [ "${USE_FLAGS:0:1}" = "1" ] ; then | |
| echo $cuda | |
| source ./ci_scripts/add_cuda_11_5.sh; | |
| fi | |
| if [ "${USE_FLAGS:1:1}" = "1" ] ; then | |
| sudo apt-get install mpich; | |
| sudo apt-get install libmpich-dev; | |
| pip install mpi4py --prefix=~/sandbox | |
| #pip install mpi4py --no-cache-dir --prefix=~/sandbox; | |
| #python -m pip install git+https://github.com/mpi4py/mpi4py | |
| python -c "import mpi4py;print(mpi4py.get_include())"; | |
| fi | |
| ls -l $PYTHONLIB | |
| - name: Build | |
| run: | | |
| export PATH=/usr/local/cuda-${CUDA}/bin:~/sandbox/bin:$PATH | |
| PYTHONLIB=~/sandbox/lib/python${{ matrix.python-version }}/site-packages | |
| export PYTHONPATH=$PYTHONLIB:$PYTHONPATH | |
| echo $PATH | |
| echo $PYTHONPATH | |
| echo $SANDBOX | |
| echo "SWIG exe"$(which swig) | |
| if [ "${USE_FLAGS}" = "000" ]; then | |
| # test workflow to manually run swig | |
| python setup.py clean --swig | |
| python setup.py install --ext-only --with-gslib --verbose | |
| python setup.py install --swig --with-gslib --verbose | |
| python setup.py install --skip-ext --skip-swig --with-gslib --verbose | |
| fi | |
| if [ "${USE_FLAGS}" = "010" ]; then | |
| python setup.py install --with-gslib --with-parallel --prefix=$SANDBOX | |
| fi | |
| - name: RUN_EXAMPLES | |
| run: | | |
| export PATH=/usr/local/cuda-${CUDA}/bin:$PATH | |
| PYTHONLIB=~/sandbox/lib/python${{ matrix.python-version }}/site-packages | |
| export PYTHONPATH=$PYTHONLIB:$PYTHONPATH | |
| echo $PATH | |
| echo $PYTHONPATH | |
| echo $SANDBOX | |
| cd test | |
| echo $PATH | |
| echo $PYTHONPATH | |
| if [ "${USE_FLAGS}" = "000" ]; then | |
| python run_examples.py -serial -verbose | |
| fi | |
| if [ "${USE_FLAGS}" = "010" ]; then | |
| which mpicc | |
| python run_examples.py -parallel -verbose -np 2 | |
| fi | |
| - name: Generate Artifact | |
| if: always() | |
| run: | | |
| tar -cvzf sandbox.tar.gz test/sandbox | |
| - name: Generate artifact name | |
| if: always() | |
| id: generate-name | |
| run: | | |
| txt=$(python -c "import datetime;print(datetime.datetime.now().strftime('%H_%M_%S_%f'))") | |
| name="test_result_"${txt}"_"${{ github.run_id }}".tar.gz" | |
| echo $name | |
| # (deprecated) echo "::set-output name=artifact::${name}" | |
| echo "artifact=${name}" >> $GITHUB_OUTPUT | |
| - name: Upload Artifact | |
| uses: actions/upload-artifact@v3 | |
| if: failure() | |
| with: | |
| name: ${{ steps.generate-name.outputs.artifact }} | |
| path: sandbox.tar.gz | |
| retention-days: 1 |