Merge pull request #2681 from eseiler/misc/3.0.3 #5
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name: SeqAn3 CI on Linux | |
on: | |
push: | |
branches: | |
# Push events to branches matching refs/heads/master | |
- 'master' | |
# Push events to branches matching refs/heads/release* | |
- 'release*' | |
pull_request: | |
env: | |
CMAKE_VERSION: 3.8.2 | |
SEQAN3_NO_VERSION_CHECK: 1 | |
TZ: Europe/Berlin | |
defaults: | |
run: | |
shell: bash -ex {0} | |
jobs: | |
build: | |
name: ${{ matrix.name }} | |
runs-on: ubuntu-20.04 | |
timeout-minutes: 120 | |
strategy: | |
fail-fast: true | |
matrix: | |
include: | |
- name: "Coverage gcc7" | |
cxx: "g++-7" | |
cc: "gcc-7" | |
build: coverage | |
build_type: Debug | |
build_threads: 2 | |
test_threads: 2 | |
- name: "Unit gcc11" | |
cxx: "g++-11" | |
cc: "gcc-11" | |
build: unit | |
build_type: Release | |
build_threads: 2 | |
test_threads: 2 | |
- name: "Unit gcc10" | |
cxx: "g++-10" | |
cc: "gcc-10" | |
build: unit | |
build_type: Release | |
build_threads: 2 | |
test_threads: 2 | |
- name: "Unit gcc9 (c++2a)" | |
cxx: "g++-9" | |
cc: "gcc-9" | |
build: unit | |
build_type: Release | |
build_threads: 2 | |
test_threads: 2 | |
cxx_flags: "-std=c++2a" | |
- name: "Unit gcc8" | |
cxx: "g++-8" | |
cc: "gcc-8" | |
build: unit | |
build_type: Release | |
build_threads: 2 | |
test_threads: 2 | |
- name: "Unit gcc7" | |
cxx: "g++-7" | |
cc: "gcc-7" | |
build: unit | |
build_type: Release | |
build_threads: 2 | |
test_threads: 2 | |
steps: | |
- name: Checkout SeqAn3 | |
uses: actions/checkout@v2 | |
with: | |
path: seqan3 | |
fetch-depth: 2 | |
submodules: true | |
- name: Checkout SeqAn2 | |
uses: actions/checkout@v2 | |
with: | |
repository: seqan/seqan | |
ref: develop | |
path: seqan3/submodules/seqan | |
- name: Configure APT | |
continue-on-error: true | |
run: bash ./seqan3/.github/workflows/scripts/configure_apt.sh | |
- name: Install CMake | |
run: bash ./seqan3/.github/workflows/scripts/install_cmake.sh | |
- name: Install ccache | |
run: sudo apt-get install --yes ccache | |
- name: Install compiler ${{ matrix.cxx }} | |
run: sudo apt-get install --yes ${{ matrix.cxx }} | |
- name: Install lcov | |
if: matrix.build == 'coverage' | |
run: | | |
sudo apt-get install --yes lcov | |
sudo update-alternatives --install /usr/bin/gcov gcov /usr/bin/gcov-7 100 | |
- name: Load ccache | |
uses: actions/cache@v2 | |
with: | |
path: .ccache | |
key: ${{ runner.os }}-${{ matrix.name }}-ccache-${{ github.ref }}-${{ github.run_number }} | |
# Restoring: From current branch, otherwise from base branch, otherwise from any branch. | |
restore-keys: | | |
${{ runner.os }}-${{ matrix.name }}-ccache-${{ github.ref }} | |
${{ runner.os }}-${{ matrix.name }}-ccache-${{ github.base_ref }} | |
${{ runner.os }}-${{ matrix.name }}-ccache- | |
- name: Tool versions | |
run: | | |
env cmake --version | |
env ${{ matrix.cxx }} --version | |
- name: Configure tests | |
env: | |
CXX: ${{ matrix.cxx }} | |
CC: ${{ matrix.cc }} | |
run: | | |
mkdir seqan3-build | |
cd seqan3-build | |
cmake ../seqan3/test/${{ matrix.build }} -DCMAKE_BUILD_TYPE=${{ matrix.build_type }} -DCMAKE_CXX_FLAGS="${{ matrix.cxx_flags }}" -DSEQAN3_VERBOSE_TESTS=OFF -DSEQAN3_BENCHMARK_MIN_TIME=0.01 | |
make gtest_build | |
- name: Build tests | |
env: | |
CCACHE_BASEDIR: ${{ github.workspace }} | |
CCACHE_DIR: ${{ github.workspace }}/.ccache | |
CCACHE_COMPRESS: true | |
CCACHE_COMPRESSLEVEL: 6 | |
CCACHE_MAXSIZE: 1G | |
run: | | |
ccache -p || true | |
cd seqan3-build | |
make -k -j${{ matrix.build_threads }} | |
ccache -s || true | |
- name: Run tests | |
if: matrix.build != 'coverage' | |
run: | | |
cd seqan3-build | |
ctest . -j${{ matrix.test_threads }} --output-on-failure | |
- name: Submit coverage build | |
if: matrix.build == 'coverage' | |
uses: codecov/codecov-action@v1 | |
with: | |
files: ${{ github.workspace }}/seqan3-build/seqan3_coverage | |
root_dir: ${{ github.workspace }}/seqan3 |