Debug pynwb/hdmf error

kushalbakshi · Apr 19, 2024 · 5444736 · 5444736
1 parent b14efdd
commit 5444736
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Showing 2 changed files with 1 addition and 2 deletions.
diff --git a/.devcontainer/devcontainer.json b/.devcontainer/devcontainer.json
@@ -7,7 +7,7 @@
 		"LOCAL_WORKSPACE_FOLDER": "${localWorkspaceFolder}"
 	},
 	"onCreateCommand": "mkdir -p ${EPHYS_ROOT_DATA_DIR} && pip install -e .[nwb]",
-	"postStartCommand": "docker volume prune -f && s3fs ${DJ_PUBLIC_S3_LOCATION} ${EPHYS_ROOT_DATA_DIR} -o nonempty,multipart_size=530,endpoint=us-east-1,url=http://s3.amazonaws.com,public_bucket=1",
+	"postStartCommand": "pip uninstall hdmf && pip install pynwb && docker volume prune -f && s3fs ${DJ_PUBLIC_S3_LOCATION} ${EPHYS_ROOT_DATA_DIR} -o nonempty,multipart_size=530,endpoint=us-east-1,url=http://s3.amazonaws.com,public_bucket=1",
 	"hostRequirements": {
 		"cpus": 4,
 		"memory": "8gb",

diff --git a/docker-compose-db.yaml b/docker-compose-db.yaml
@@ -1,5 +1,4 @@
 # MYSQL_VER=8.0 docker compose -f docker-compose-db.yaml up --build
-version: "3"
 services:
   db:
     restart: always