Upgrade rcf to 4.0

This PR upgrades rcf to 4.0 as it has bug fixes and support for streaming imputation mode. Testing done: 1. gradle build Signed-off-by: Kaituo Li <[email protected]>
kaituo · Mar 26, 2024 · 274943d · 274943d
1 parent 8ca1d0d
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diff --git a/.github/workflows/backport.yml b/.github/workflows/backport.yml
@@ -7,6 +7,7 @@ on:
 
 jobs:
   backport:
+    if: github.event.pull_request.merged == true
     runs-on: ubuntu-latest
     permissions:
       contents: write
@@ -25,4 +26,5 @@ jobs:
         uses: VachaShah/[email protected]
         with:
           github_token: ${{ steps.github_app_token.outputs.token }}
-          branch_name: backport/backport-${{ github.event.number }}
+          head_template: backport/backport-<%= number %>-to-<%= base %>
+          failure_labels: backport-failed
diff --git a/.github/workflows/benchmark.yml b/.github/workflows/benchmark.yml
@@ -38,7 +38,7 @@ jobs:
 
       # anomaly-detection
       - name: Checkout AD
-        uses: actions/checkout@v4
+        uses: actions/checkout@v3
 
       - name: Build and Run Tests
         run: |

diff --git a/.github/workflows/test_build_multi_platform.yml b/.github/workflows/test_build_multi_platform.yml
@@ -46,7 +46,7 @@ jobs:
 
       - name: Build and Run Tests
         run: |
-          ./gradlew build
+          ./gradlew build -x spotlessJava
       - name: Publish to Maven Local
         run: |
           ./gradlew publishToMavenLocal
@@ -85,13 +85,13 @@ jobs:
           java-version: ${{ matrix.java }}
 
       - name: Checkout AD
-        uses: actions/checkout@v4
+        uses: actions/checkout@v3
 
       - name: Assemble / build / mavenlocal / integTest
         run: |
           chown -R 1000:1000 `pwd`
           su `id -un 1000` -c "./gradlew assemble &&
-                               ./gradlew build &&
+                               ./gradlew build -x spotlessJava &&
                                ./gradlew publishToMavenLocal &&
                                ./gradlew integTest -PnumNodes=3"
       - name: Upload Coverage Report
@@ -127,7 +127,7 @@ jobs:
           ./gradlew assemble
       - name: Build and Run Tests
         run: |
-          ./gradlew build
+          ./gradlew build -x spotlessJava
       - name: Publish to Maven Local
         run: |
           ./gradlew publishToMavenLocal

diff --git a/.github/workflows/test_bwc.yml b/.github/workflows/test_bwc.yml
@@ -38,7 +38,7 @@ jobs:
 
       # anomaly-detection
       - name: Checkout AD
-        uses: actions/checkout@v4
+        uses: actions/checkout@v3
 
       - name: Assemble anomaly-detection
         run: |

diff --git a/build.gradle b/build.gradle
@@ -35,7 +35,7 @@ buildscript {
         js_resource_folder = "src/test/resources/job-scheduler"
         common_utils_version = System.getProperty("common_utils.version", opensearch_build)
         job_scheduler_version = System.getProperty("job_scheduler.version", opensearch_build)
-        bwcVersionShort = "2.10.0"
+        bwcVersionShort = "2.14.0"
         bwcVersion = bwcVersionShort + ".0"
         bwcOpenSearchADDownload = 'https://ci.opensearch.org/ci/dbc/distribution-build-opensearch/' + bwcVersionShort + '/latest/linux/x64/tar/builds/' +
                 'opensearch/plugins/opensearch-anomaly-detection-' + bwcVersion + '.zip'
@@ -126,9 +126,9 @@ dependencies {
     implementation group: 'com.yahoo.datasketches', name: 'memory', version: '0.12.2'
     implementation group: 'commons-lang', name: 'commons-lang', version: '2.6'
     implementation group: 'org.apache.commons', name: 'commons-pool2', version: '2.12.0'
-    implementation 'software.amazon.randomcutforest:randomcutforest-serialization:3.8.0'
-    implementation 'software.amazon.randomcutforest:randomcutforest-parkservices:3.8.0'
-    implementation 'software.amazon.randomcutforest:randomcutforest-core:3.8.0'
+    implementation 'software.amazon.randomcutforest:randomcutforest-serialization:4.0.0'
+    implementation 'software.amazon.randomcutforest:randomcutforest-parkservices:4.0.0'
+    implementation 'software.amazon.randomcutforest:randomcutforest-core:4.0.0'
 
     // we inherit jackson-core from opensearch core
     implementation "com.fasterxml.jackson.core:jackson-databind:2.16.1"
@@ -149,6 +149,9 @@ dependencies {
         exclude group: 'org.ow2.asm', module: 'asm-tree'
     }
 
+    // used for output encoding of config descriptions
+    implementation group: 'org.owasp.encoder' , name: 'encoder', version: '1.2.3'
+
     testImplementation group: 'pl.pragmatists', name: 'JUnitParams', version: '1.1.1'
     testImplementation group: 'org.mockito', name: 'mockito-core', version: '5.9.0'
     testImplementation group: 'org.objenesis', name: 'objenesis', version: '3.3'
@@ -538,7 +541,7 @@ List<Provider<RegularFile>> plugins = [
 
 // Creates 2 test clusters with 3 nodes of the old version. 
 2.times {i -> 
-    task "${baseName}#oldVersionClusterTask$i"(type: StandaloneRestIntegTestTask) {
+    task "${baseName}#oldVersionClusterTask$i"(type: RestIntegTestTask) {
         useCluster testClusters."${baseName}$i"
         filter {
             includeTestsMatching "org.opensearch.ad.bwc.*IT"
@@ -554,7 +557,7 @@ List<Provider<RegularFile>> plugins = [
 // Upgrades one node of the old cluster to new OpenSearch version with upgraded plugin version 
 // This results in a mixed cluster with 2 nodes on the old version and 1 upgraded node.
 // This is also used as a one third upgraded cluster for a rolling upgrade.
-task "${baseName}#mixedClusterTask"(type: StandaloneRestIntegTestTask) {
+task "${baseName}#mixedClusterTask"(type: RestIntegTestTask) {
     useCluster testClusters."${baseName}0"
     dependsOn "${baseName}#oldVersionClusterTask0"
     doFirst {
@@ -573,7 +576,7 @@ task "${baseName}#mixedClusterTask"(type: StandaloneRestIntegTestTask) {
 // Upgrades the second node to new OpenSearch version with upgraded plugin version after the first node is upgraded.
 // This results in a mixed cluster with 1 node on the old version and 2 upgraded nodes.
 // This is used for rolling upgrade.
-task "${baseName}#twoThirdsUpgradedClusterTask"(type: StandaloneRestIntegTestTask) {
+task "${baseName}#twoThirdsUpgradedClusterTask"(type: RestIntegTestTask) {
     dependsOn "${baseName}#mixedClusterTask"
     useCluster testClusters."${baseName}0"
     doFirst {
@@ -592,7 +595,7 @@ task "${baseName}#twoThirdsUpgradedClusterTask"(type: StandaloneRestIntegTestTas
 // Upgrades the third node to new OpenSearch version with upgraded plugin version after the second node is upgraded.
 // This results in a fully upgraded cluster.
 // This is used for rolling upgrade.
-task "${baseName}#rollingUpgradeClusterTask"(type: StandaloneRestIntegTestTask) {
+task "${baseName}#rollingUpgradeClusterTask"(type: RestIntegTestTask) {
     dependsOn "${baseName}#twoThirdsUpgradedClusterTask"
     useCluster testClusters."${baseName}0"
     doFirst {
@@ -611,7 +614,7 @@ task "${baseName}#rollingUpgradeClusterTask"(type: StandaloneRestIntegTestTask)
 
 // Upgrades all the nodes of the old cluster to new OpenSearch version with upgraded plugin version 
 // at the same time resulting in a fully upgraded cluster.
-task "${baseName}#fullRestartClusterTask"(type: StandaloneRestIntegTestTask) {
+task "${baseName}#fullRestartClusterTask"(type: RestIntegTestTask) {
     dependsOn "${baseName}#oldVersionClusterTask1"
     useCluster testClusters."${baseName}1"
     doFirst {
@@ -627,7 +630,7 @@ task "${baseName}#fullRestartClusterTask"(type: StandaloneRestIntegTestTask) {
 }
 
 // A bwc test suite which runs all the bwc tasks combined.
-task bwcTestSuite(type: StandaloneRestIntegTestTask) {
+task bwcTestSuite(type: RestIntegTestTask) {
     exclude '**/*Test*'
     exclude '**/*IT*'
     dependsOn tasks.named("${baseName}#mixedClusterTask")

diff --git a/src/main/java/org/opensearch/ad/ml/CheckpointDao.java b/src/main/java/org/opensearch/ad/ml/CheckpointDao.java
@@ -744,7 +744,8 @@ private Optional<ThresholdedRandomCutForest> convertToTRCF(Optional<RandomCutFor
         if (kllThreshold.isPresent()) {
             scores = kllThreshold.get().extractScores();
         }
-        return Optional.of(new ThresholdedRandomCutForest(rcf.get(), anomalyRate, scores));
+        // last parameter is lastShingledInput. Since we don't know it, use all 0 double array
+        return Optional.of(new ThresholdedRandomCutForest(rcf.get(), anomalyRate, scores, new double[rcf.get().getDimensions()]));
     }
 
     /**

diff --git a/src/main/java/org/opensearch/ad/task/ADTaskManager.java b/src/main/java/org/opensearch/ad/task/ADTaskManager.java
@@ -18,20 +18,7 @@
 import static org.opensearch.ad.constant.ADCommonMessages.NO_ELIGIBLE_NODE_TO_RUN_DETECTOR;
 import static org.opensearch.ad.constant.ADCommonName.DETECTION_STATE_INDEX;
 import static org.opensearch.ad.indices.ADIndexManagement.ALL_AD_RESULTS_INDEX_PATTERN;
-import static org.opensearch.ad.model.ADTask.COORDINATING_NODE_FIELD;
 import static org.opensearch.ad.model.ADTask.DETECTOR_ID_FIELD;
-import static org.opensearch.ad.model.ADTask.ERROR_FIELD;
-import static org.opensearch.ad.model.ADTask.ESTIMATED_MINUTES_LEFT_FIELD;
-import static org.opensearch.ad.model.ADTask.EXECUTION_END_TIME_FIELD;
-import static org.opensearch.ad.model.ADTask.EXECUTION_START_TIME_FIELD;
-import static org.opensearch.ad.model.ADTask.INIT_PROGRESS_FIELD;
-import static org.opensearch.ad.model.ADTask.IS_LATEST_FIELD;
-import static org.opensearch.ad.model.ADTask.LAST_UPDATE_TIME_FIELD;
-import static org.opensearch.ad.model.ADTask.PARENT_TASK_ID_FIELD;
-import static org.opensearch.ad.model.ADTask.STATE_FIELD;
-import static org.opensearch.ad.model.ADTask.STOPPED_BY_FIELD;
-import static org.opensearch.ad.model.ADTask.TASK_PROGRESS_FIELD;
-import static org.opensearch.ad.model.ADTask.TASK_TYPE_FIELD;
 import static org.opensearch.ad.model.ADTaskType.ALL_HISTORICAL_TASK_TYPES;
 import static org.opensearch.ad.model.ADTaskType.HISTORICAL_DETECTOR_TASK_TYPES;
 import static org.opensearch.ad.model.ADTaskType.REALTIME_TASK_TYPES;
@@ -52,6 +39,19 @@
 import static org.opensearch.timeseries.constant.CommonName.TASK_ID_FIELD;
 import static org.opensearch.timeseries.model.TaskState.NOT_ENDED_STATES;
 import static org.opensearch.timeseries.model.TaskType.taskTypeToString;
+import static org.opensearch.timeseries.model.TimeSeriesTask.COORDINATING_NODE_FIELD;
+import static org.opensearch.timeseries.model.TimeSeriesTask.ERROR_FIELD;
+import static org.opensearch.timeseries.model.TimeSeriesTask.ESTIMATED_MINUTES_LEFT_FIELD;
+import static org.opensearch.timeseries.model.TimeSeriesTask.EXECUTION_END_TIME_FIELD;
+import static org.opensearch.timeseries.model.TimeSeriesTask.EXECUTION_START_TIME_FIELD;
+import static org.opensearch.timeseries.model.TimeSeriesTask.INIT_PROGRESS_FIELD;
+import static org.opensearch.timeseries.model.TimeSeriesTask.IS_LATEST_FIELD;
+import static org.opensearch.timeseries.model.TimeSeriesTask.LAST_UPDATE_TIME_FIELD;
+import static org.opensearch.timeseries.model.TimeSeriesTask.PARENT_TASK_ID_FIELD;
+import static org.opensearch.timeseries.model.TimeSeriesTask.STATE_FIELD;
+import static org.opensearch.timeseries.model.TimeSeriesTask.STOPPED_BY_FIELD;
+import static org.opensearch.timeseries.model.TimeSeriesTask.TASK_PROGRESS_FIELD;
+import static org.opensearch.timeseries.model.TimeSeriesTask.TASK_TYPE_FIELD;
 import static org.opensearch.timeseries.settings.TimeSeriesSettings.NUM_MIN_SAMPLES;
 import static org.opensearch.timeseries.util.ExceptionUtil.getErrorMessage;
 import static org.opensearch.timeseries.util.ExceptionUtil.getShardsFailure;

diff --git a/src/test/java/org/opensearch/ad/bwc/ADBackwardsCompatibilityIT.java b/src/test/java/org/opensearch/ad/bwc/ADBackwardsCompatibilityIT.java
@@ -167,7 +167,7 @@ public void testBackwardsCompatibility() throws Exception {
                 case MIXED:
                     // TODO: We have no way to specify whether send request to old node or new node now.
                     // Add more test later when it's possible to specify request node.
-                    Assert.assertTrue(pluginNames.contains("opensearch-anomaly-detection"));
+                    Assert.assertTrue(pluginNames.contains("opensearch-time-series-analytics"));
                     Assert.assertTrue(pluginNames.contains("opensearch-job-scheduler"));
 
                     // Create single entity detector and start realtime job

diff --git a/src/test/java/org/opensearch/ad/ml/CheckpointDaoTests.java b/src/test/java/org/opensearch/ad/ml/CheckpointDaoTests.java
@@ -1067,27 +1067,22 @@ public void testDeserializeTRCFModel() throws Exception {
         coldStartData.add(sample4);
         coldStartData.add(sample5);
 
-        // This scores were generated with the sample data but on RCF3.0-rc1 and we are comparing them
-        // to the scores generated by the imported RCF3.0-rc2.1
+        // This scores were generated with the sample data on RCF4.0. RCF4.0 changed implementation
+        // and we are seeing different rcf scores between 4.0 and 3.8. This is verified by switching
+        // rcf version between 3.8 and 4.0 while other code in AD unchanged. But we get different scores.
         List<Double> scores = new ArrayList<>();
-        scores.add(4.814651669367903);
-        scores.add(5.566968073093689);
-        scores.add(5.919907610660049);
-        scores.add(5.770278090352401);
-        scores.add(5.319779117320102);
-
-        List<Double> grade = new ArrayList<>();
-        grade.add(1.0);
-        grade.add(0.0);
-        grade.add(0.0);
-        grade.add(0.0);
-        grade.add(0.0);
+        scores.add(5.052069275347555);
+        scores.add(6.117465704461799);
+        scores.add(6.6401649744661055);
+        scores.add(6.918514609476484);
+        scores.add(6.928318158276434);
+
         // rcf 3.8 has a number of improvements on thresholder and predictor corrector.
         // We don't expect the results have the same anomaly grade.
         for (int i = 0; i < coldStartData.size(); i++) {
             forest.process(coldStartData.get(i), 0);
             AnomalyDescriptor descriptor = forest.process(coldStartData.get(i), 0);
-            assertEquals(descriptor.getRCFScore(), scores.get(i), 1e-9);
+            assertEquals(scores.get(i), descriptor.getRCFScore(), 1e-9);
         }
     }
 
@@ -1133,21 +1128,22 @@ public void testDeserialize_rcf3_rc3_single_stream_model() throws Exception {
         coldStartData.add(sample4);
         coldStartData.add(sample5);
 
-        // This scores were generated with the sample data but on RCF3.0-rc1 and we are comparing them
-        // to the scores generated by the imported RCF3.0-rc2.1
+        // This scores were generated with the sample data on RCF4.0. RCF4.0 changed implementation
+        // and we are seeing different rcf scores between 4.0 and 3.8. This is verified by switching
+        // rcf version between 3.8 and 4.0 while other code in AD unchanged. But we get different scores.
         List<Double> scores = new ArrayList<>();
-        scores.add(3.3830441158587066);
-        scores.add(2.825961659490065);
-        scores.add(2.4685871670647384);
-        scores.add(2.3123460886413647);
-        scores.add(2.1401987653477135);
+        scores.add(3.678754481587072);
+        scores.add(3.6809634269790252);
+        scores.add(3.683659822587799);
+        scores.add(3.6852688612219646);
+        scores.add(3.6859330728661064);
 
         // rcf 3.8 has a number of improvements on thresholder and predictor corrector.
         // We don't expect the results have the same anomaly grade.
         for (int i = 0; i < coldStartData.size(); i++) {
             forest.process(coldStartData.get(i), 0);
             AnomalyDescriptor descriptor = forest.process(coldStartData.get(i), 0);
-            assertEquals(descriptor.getRCFScore(), scores.get(i), 1e-9);
+            assertEquals(scores.get(i), descriptor.getRCFScore(), 1e-9);
         }
     }
 
@@ -1190,21 +1186,22 @@ public void testDeserialize_rcf3_rc3_hc_model() throws Exception {
         coldStartData.add(sample4);
         coldStartData.add(sample5);
 
-        // This scores were generated with the sample data but on RCF3.0-rc1 and we are comparing them
-        // to the scores generated by the imported RCF3.0-rc2.1
+        // This scores were generated with the sample data but on RCF4.0 that changed implementation
+        // and we are seeing different rcf scores between 4.0 and 3.8. This is verified by switching
+        // rcf version between 3.8 and 4.0 while other code in AD unchanged. But we get different scores.
         List<Double> scores = new ArrayList<>();
-        scores.add(1.86645896573027);
-        scores.add(1.8760247712797833);
-        scores.add(1.6809181763279901);
-        scores.add(1.7126716645678555);
-        scores.add(1.323776514074674);
+        scores.add(2.119532552959117);
+        scores.add(2.7347456872746325);
+        scores.add(3.066704948143919);
+        scores.add(3.2965580521876725);
+        scores.add(3.1888920146607047);
 
         // rcf 3.8 has a number of improvements on thresholder and predictor corrector.
         // We don't expect the results have the same anomaly grade.
         for (int i = 0; i < coldStartData.size(); i++) {
             forest.process(coldStartData.get(i), 0);
             AnomalyDescriptor descriptor = forest.process(coldStartData.get(i), 0);
-            assertEquals(descriptor.getRCFScore(), scores.get(i), 1e-9);
+            assertEquals(scores.get(i), descriptor.getRCFScore(), 1e-9);
         }
     }
 

diff --git a/src/test/java/org/opensearch/ad/ml/EntityColdStarterTests.java b/src/test/java/org/opensearch/ad/ml/EntityColdStarterTests.java
@@ -740,7 +740,7 @@ public void testAccuracyOneMinuteIntervalNoInterpolation() throws Exception {
             clusterService
         );
 
-        accuracyTemplate(1, 0.6f, 0.6f);
+        accuracyTemplate(1, 0.5f, 0.5f);
     }
 
     private ModelState<EntityModel> createStateForCacheRelease() {

diff --git a/src/test/java/org/opensearch/ad/task/ADTaskManagerTests.java b/src/test/java/org/opensearch/ad/task/ADTaskManagerTests.java
@@ -79,7 +79,6 @@
 import org.opensearch.action.search.SearchResponse;
 import org.opensearch.action.search.ShardSearchFailure;
 import org.opensearch.action.update.UpdateResponse;
-import org.opensearch.ad.ADUnitTestCase;
 import org.opensearch.ad.cluster.HashRing;
 import org.opensearch.ad.indices.ADIndexManagement;
 import org.opensearch.ad.mock.model.MockSimpleLog;
@@ -89,6 +88,7 @@
 import org.opensearch.ad.model.ADTaskType;
 import org.opensearch.ad.model.AnomalyDetector;
 import org.opensearch.ad.rest.handler.IndexAnomalyDetectorJobActionHandler;
+import org.opensearch.ad.settings.AnomalyDetectorSettings;
 import org.opensearch.ad.stats.InternalStatNames;
 import org.opensearch.ad.transport.ADStatsNodeResponse;
 import org.opensearch.ad.transport.ADStatsNodesResponse;
@@ -120,6 +120,7 @@
 import org.opensearch.search.aggregations.InternalAggregations;
 import org.opensearch.search.internal.InternalSearchResponse;
 import org.opensearch.threadpool.ThreadPool;
+import org.opensearch.timeseries.AbstractTimeSeriesTest;
 import org.opensearch.timeseries.TestHelpers;
 import org.opensearch.timeseries.common.exception.DuplicateTaskException;
 import org.opensearch.timeseries.constant.CommonName;
@@ -139,7 +140,7 @@
 import com.google.common.collect.ImmutableList;
 import com.google.common.collect.ImmutableMap;
 
-public class ADTaskManagerTests extends ADUnitTestCase {
+public class ADTaskManagerTests extends AbstractTimeSeriesTest {
 
     private Settings settings;
     private Client client;
@@ -1447,10 +1448,22 @@ public void testForwardRequestToLeadNodeWithNotExistingNode() throws IOException
     @SuppressWarnings("unchecked")
     public void testScaleTaskLaneOnCoordinatingNode() {
         ADTask adTask = mock(ADTask.class);
-        when(adTask.getCoordinatingNode()).thenReturn(node1.getId());
-        when(nodeFilter.getEligibleDataNodes()).thenReturn(new DiscoveryNode[] { node1, node2 });
-        ActionListener<JobResponse> listener = mock(ActionListener.class);
-        adTaskManager.scaleTaskLaneOnCoordinatingNode(adTask, 2, transportService, listener);
+        try {
+            // bring up real transport service as mockito cannot mock final method
+            // and transportService.sendRequest is called. A lot of null pointer
+            // exception will be thrown if we use mocked transport service.
+            setUpThreadPool(ADTaskManagerTests.class.getSimpleName());
+            setupTestNodes(AnomalyDetectorSettings.AD_MAX_ENTITIES_PER_QUERY, AnomalyDetectorSettings.AD_PAGE_SIZE);
+            when(adTask.getCoordinatingNode()).thenReturn(testNodes[1].getNodeId());
+            when(nodeFilter.getEligibleDataNodes())
+                .thenReturn(new DiscoveryNode[] { testNodes[0].discoveryNode(), testNodes[1].discoveryNode() });
+            ActionListener<JobResponse> listener = mock(ActionListener.class);
+
+            adTaskManager.scaleTaskLaneOnCoordinatingNode(adTask, 2, testNodes[1].transportService, listener);
+        } finally {
+            tearDownTestNodes();
+            tearDownThreadPool();
+        }
     }
 
     @SuppressWarnings("unchecked")