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fastq files produced by 'sga correct' not always match the length of the reads #129

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mictadlo opened this issue Sep 26, 2016 · 0 comments

mictadlo commented Sep 26, 2016

Hi,
Here is mention:

You should keep in mind that the fastq files will be converted to .fasta after the overlap correction (which, by default, is on) because the quality values in the .fastq file produced by 'sga correct' not always match the length of the reads if insertions/deletions were corrected (newer versions of sga may solve this issue).

Does the problem has been resolved in the newer SGA version?

Thank you in advance.

Best wishes,

Mic

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