Surrogate Type Extension for MI Kraskov Estimator #100
Conversation
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
…rty plumbing in interface class
Also fixed rotate surrogate selection, list was being rotate continuously rather than rotating the initial index list, which nullified the dyncorrexcl setting.
Pull in jlizier changes
Add Surrogate Types Extension to Mutual Information Estimator
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment
Add this suggestion to a batch that can be applied as a single commit.
This suggestion is invalid because no changes were made to the code.
Suggestions cannot be applied while the pull request is closed.
Suggestions cannot be applied while viewing a subset of changes.
Only one suggestion per line can be applied in a batch.
Add this suggestion to a batch that can be applied as a single commit.
Applying suggestions on deleted lines is not supported.
You must change the existing code in this line in order to create a valid suggestion.
Outdated suggestions cannot be applied.
This suggestion has been applied or marked resolved.
Suggestions cannot be applied from pending reviews.
Suggestions cannot be applied on multi-line comments.
Suggestions cannot be applied while the pull request is queued to merge.
Suggestion cannot be applied right now. Please check back later.
Added support for choice of surrogate types in KSG continuous Mutual Information estimator.
Coded as part of CSYS5050 Master of Complex Systems Capstone Project, semester 1 2024.
Added generateRotatedSurrogates method in RandomGenerator
Added SURROGATE_TYPE parameter and logic within MutualInfoCalculatorMultiVariate and MutualInfoMultiVariateCommon to support new surrogate selection method.
Refactored DYN_CORR_EXCL_TIME from individual instantiations in kernel and kraskov classes into common in order to support exclusion window setting within rotated surrogates.
Updated AutoAnalyser to reflect changes.
Added Python Example 10 with an example that depicts the effect of the biased shuffled surrogates against the rotated surrogates for autocorrelated data: