Feature/complex number support #5
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…#4453) All calls to the H5I routines are now made in API routines (sometimes in FUNC_ENTER/LEAVE_* macros), except for some calls to H5E_clear_stack() within the library, but I'm planning to remove those over time. Also, made all the library internal error messages into static const variables, instead of malloc'ing them, which means that they can just be referenced and not copied. Several new and updated auto-generated header files were necessary to enable this.
…conversion (HDFGroup#4459) Also fixes issues with handling of partially initialized datatypes during library shutdown
…t sentence alias (HDFGroup#4474)
…up#4477) * Properly clean up cache when failing to load an object header * Don't check message type a second time in H5G__open_oid if the first attempt returns error * Add more asserts to H5O__assert() to avoid segfaults --------- Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com>
Fixes a race condition where the reader opens the file and sets its EOF from the file's size (from the stat() call in the driver open callback). Then, before the reader can read the file's superblock, a SWMR writer races in, extends the file, and closes the file, writing an updated superblock with the 'writer' and 'SWMR writer' flags in the superblock off (appropriately). Then the reader proceeds to read the superblock, and flags the EOF as wrong. Taking out the check for the 'writer' and 'SWMR writer' flags will cause SWMR readers to avoid flagging the file as incorrect.
Document the limitation in the Passthrough Conncector section of the VOL Connector Author Guide. The limitation is posted by Neil in the github issue on Dec 22, 2022.
…ze (HDFGroup#4491) * Improve spec. reading superblock into cache (a little) by using v2 size Instead of reading the absolute minimal possible, use the likely value of a v2+ superblock w/8-byte addresses & lengths.
…te with corder tracking enabled (HDFGroup#4462) * Fix for github issue HDFGroup#1388: can't delete renamed dense attribute with corder tracking enabled The problem occurs in step 3(b) below which will delete the attribute with corder x from the creation order index v2 B-tree. The rename sequence in H5A__dense_rename() occurs in the following order: 1) The old attribute with corder x was removed from the creation order index v2 B-tree 2) The new renamed attribute was inserted via H5A__dense_insert(): (a) insert the attribute with new name j into the name index v2 B-tree (b) insert the attribute with corder x into the creation order index v2 B-tree 3) The old attribute was removed via H5A__dense_remove(): (a) remove the attribute with old name k from the name index v2 B-tree (b) remove the attribute with coorder x from the creation order index v2 B-tree Fix: deactivate the "corder_bt2_addr" field so that H5A__dense_remove() won't delete the attribute with corder x from the creation order index v2 B-tree.
* Revert "Remove Autotools sed hack (HDFGroup#3848)" This reverts commit 8b3ffde. * Fix libtool sed cleanup on MacOS Convert sed -i line to sed > libtool.bak && mv libtool.bak libtool to avoid non-portable -i option.
Forum post #12321
* Set H5 specific vars immediately if legacy find * Correct find process vars (vs in-line build) * Correct SZIP find * Everything is libaec 1.0.6 or newer * Correct option help text
…4492) Instead of reading the absolute minimal possible, use the likely value of a v2+ superblock w/8-byte addresses & lengths.
Move without other changes: src/libhdf5.settings.in -> src/libhdf5.settings.autotools.in config/cmake/libhdf5.settings.cmake.in -> src/libhdf5.settings.cmake.in
* Allow HDF5_LIB_INFIX to work with DLL * Separate individual library name into parts and add suffix option * Java cannot use alternative names and removed extra setting * Incorporate the underscore into the CORE name
* point to HDFGroup repository * updated checkout locations * Fix incorrect and dead documentation link in release_docs/RELEASE_PROCESS.md. --------- Co-authored-by: Larry Knox <[email protected]>
* Switch H5FDquery() return values to use library's FAIL / SUCCEED macros * Update return value also
* Update error output w/new routine name
HDFGroup#4533) * Fix a few function names in USAGE comments that don't match the actual function names. * Remove typo '[' * Switch to working url for api-compatibility-macros.html.
These have been failing for a week or two for unclear reasons, both in the Autotools and CMake. No obvious library changes triggered this. See GitHub issue HDFGroup#4539 for more info/discussion The Julia tests will be disabled until the root cause is found.
Bumps the github-actions group with 3 updates: [softprops/action-gh-release](https://github.com/softprops/action-gh-release), [ossf/scorecard-action](https://github.com/ossf/scorecard-action) and [github/codeql-action](https://github.com/github/codeql-action). Updates `softprops/action-gh-release` from 2.0.4 to 2.0.5 - [Release notes](https://github.com/softprops/action-gh-release/releases) - [Changelog](https://github.com/softprops/action-gh-release/blob/master/CHANGELOG.md) - [Commits](softprops/action-gh-release@9d7c94c...69320db) Updates `ossf/scorecard-action` from 2.3.1 to 2.3.3 - [Release notes](https://github.com/ossf/scorecard-action/releases) - [Changelog](https://github.com/ossf/scorecard-action/blob/main/RELEASE.md) - [Commits](ossf/scorecard-action@0864cf1...dc50aa9) Updates `github/codeql-action` from 3.25.3 to 3.25.7 - [Release notes](https://github.com/github/codeql-action/releases) - [Changelog](https://github.com/github/codeql-action/blob/main/CHANGELOG.md) - [Commits](github/codeql-action@d39d31e...f079b84) --- updated-dependencies: - dependency-name: softprops/action-gh-release dependency-type: direct:production update-type: version-update:semver-patch dependency-group: github-actions - dependency-name: ossf/scorecard-action dependency-type: direct:production update-type: version-update:semver-patch dependency-group: github-actions - dependency-name: github/codeql-action dependency-type: direct:production update-type: version-update:semver-patch dependency-group: github-actions ... Signed-off-by: dependabot[bot] <[email protected]> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
* Fix a dead link and example file names * Add the missing content of a section
…up#3505) The `off_t` type is only 32-bit on Windows, which makes it impossible to link to higher offsets in large files. The `H5O_efl_entry_t` struct defines its `offset` field already as `HDoff_t`, so no additional conversion is needed.
replace usages of word "complex" to distinguish from complex datatypes
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