barcode_correction.py: modified mapping quality setting of reads with… #56

	name: Python Package using Conda

	on: [push]

	jobs:
	build-linux:
	runs-on: ubuntu-latest
	strategy:
	max-parallel: 5

	steps:
	- uses: actions/checkout@v2
	- name: Set up Python 3.10
	uses: actions/setup-python@v2
	with:
	python-version: '3.10'
	- name: Add conda to system path
	run: \|
	# $CONDA is an environment variable pointing to the root of the miniconda directory
	echo $CONDA/bin >> $GITHUB_PATH
	- name: Install dependencies and setup env
	run: conda env update --file environment.yml

	- name: Activate conda env and run tests
	run: \|
	source ${CONDA}/bin/activate umivar
	cd Test
	make ci

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