full update to 1.2-06

DESCRIPTION

@@ -1,7 +1,7 @@
 Package: aniMotum
 Title: Fit Continuous-Time State-Space and Latent Variable Models for Quality Control of Argos Satellite (and Other) Telemetry Data and for Estimating Changes in Animal Movement
 Version: 1.2-06
-Date: 2024-06-04
+Date: 2024-06-05
 Authors@R: 
     c(
       person(given = "Ian",

NEWS.md

@@ -1,3 +1,8 @@
+# aniMotum 1.2-06 (05/06/2024)
+
+* various minor issues fixed including: build against TMB 1.9.11, fixes error when grad specified in `sim_fit()`.
+
+
 # aniMotum 1.2 (03/11/2023)
 
 * addition of `sim_post()`, a function for posterior simulations from SSM fits, conditional on data and movement parameters

README.Rmd

@@ -60,16 +60,16 @@ options(repos = c(ianjonsen = 'https://ianjonsen.r-universe.dev',
 ```
 
 ### READ THIS CAREFULLY if you are unsure about compiler tools:
-If you don't have compiler tools installed, are uncertain if you do, or have trouble getting them to work then you can manually download a binary version of the `{aniMotum}` package for Windows or Mac from here https://ianjonsen.r-universe.dev/ui#package:aniMotum. There are 3 binary versions for Windows corresponding to a different major release of R, choose the one that matches your R version. You can check your R version by typing `R.Version()` in the R console. There are 4 binary versions for Macs, 2 for Arm 64 Macs (ie. M1 - Mx Macs) and 2 for Intel Macs (x86_64), within these 2 classes there are 2 versions for the latest release version of R and the previous version.
+If you don't have compiler tools installed, are uncertain if you do, or have trouble getting them to work then you can manually download a binary version of the `{aniMotum}` package for Windows or Mac from here https://ianjonsen.r-universe.dev/aniMotum. There are 3 binary versions for Windows corresponding to a different major release of R, choose the one that matches your R version. You can check your R version by typing `R.Version()` in the R console. There are 4 binary versions for Macs, 2 for Arm 64 Macs (ie. M1 - Mx Macs) and 2 for Intel Macs (x86_64), within these 2 classes there are 2 versions for the latest release version of R and the previous version.
 
 When downloading the binary version on a Mac, it is important to right click and choose "Download Linked File As..." so that the file isn't automatically uncompressed. If you have downloaded the file correctly, its extension will be `.tgz`, **not** `.tar`. You can use the following command in the R console to install the file you've just downloaded (where `path_to_file` is wherever you saved the download):
 ```{r, eval=FALSE}
 # for Windows
-install.packages("path_to_file\aniMotum_1.2-05.zip", 
+install.packages("path_to_file\aniMotum_1.2-06.zip", 
                  repos=NULL, type="win.binary", dependencies = TRUE)
 
 # for Mac
-install.packages("path_to_file/aniMotum_1.2-05.tgz", 
+install.packages("path_to_file/aniMotum_1.2-06.tgz", 
                  repos=NULL, type="mac.binary", dependencies = TRUE)
 
 ```

README.md

@@ -81,13 +81,13 @@ options(repos = c(ianjonsen = 'https://ianjonsen.r-universe.dev',
 If you don’t have compiler tools installed, are uncertain if you do, or
 have trouble getting them to work then you can manually download a
 binary version of the `{aniMotum}` package for Windows or Mac from here
-<https://ianjonsen.r-universe.dev/ui#package:aniMotum>. There are 3
-binary versions for Windows corresponding to a different major release
-of R, choose the one that matches your R version. You can check your R
-version by typing `R.Version()` in the R console. There are 4 binary
-versions for Macs, 2 for Arm 64 Macs (ie. M1 - Mx Macs) and 2 for Intel
-Macs (x86_64), within these 2 classes there are 2 versions for the
-latest release version of R and the previous version.
+<https://ianjonsen.r-universe.dev/aniMotum>. There are 3 binary versions
+for Windows corresponding to a different major release of R, choose the
+one that matches your R version. You can check your R version by typing
+`R.Version()` in the R console. There are 4 binary versions for Macs, 2
+for Arm 64 Macs (ie. M1 - Mx Macs) and 2 for Intel Macs (x86_64), within
+these 2 classes there are 2 versions for the latest release version of R
+and the previous version.
 
 When downloading the binary version on a Mac, it is important to right
 click and choose “Download Linked File As…” so that the file isn’t
@@ -98,11 +98,11 @@ command in the R console to install the file you’ve just downloaded
 
 ``` r
 # for Windows
-install.packages("path_to_file\aniMotum_1.2-05.zip", 
+install.packages("path_to_file\aniMotum_1.2-06.zip", 
                  repos=NULL, type="win.binary", dependencies = TRUE)
 
 # for Mac
-install.packages("path_to_file/aniMotum_1.2-05.tgz", 
+install.packages("path_to_file/aniMotum_1.2-06.tgz", 
                  repos=NULL, type="mac.binary", dependencies = TRUE)
 ```
 
@@ -188,6 +188,9 @@ map(fit,
     crs = "+proj=stere +lon_0=68 +units=km +datum=WGS84")
 ```
 
+    #> Warning: Package `magick` is required to draw images. Image not drawn.
+    #> Warning: Package `magick` is required to draw images. Image not drawn.
+
 <img src="man/figures/README-explots2-1.png" width="100%" />
 
 Southern elephant seal silhouettes kindly provided by: